Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is purL
Identifier: 159184945
GI number: 159184945
Start: 1829966
End: 1832200
Strand: Direct
Name: purL
Synonym: Atu1850
Alternate gene names: 159184945
Gene position: 1829966-1832200 (Clockwise)
Preceding gene: 15889150
Following gene: 159184946
Centisome position: 64.4
GC content: 61.61
Gene sequence:
>2235_bases ATGTCGATTTCAAACTCCATCAAGATCACCCCGGAACTCGTTGCATCCCACGGGCTGAAGCCCGACGAATACCAGCGTAT CCTCGACCTGATCGGACGGGAGCCCAGCTTTACCGAGCTTGGCATTTTCTCGGCCATGTGGAACGAGCACTGCTCCTACA AGTCTTCGAAGAAGTGGCTGAAGACCCTGCCGACAACGGGTCCGCGCGTCATTCAGGGCCCCGGTGAAAATGCCGGCGTG GTGGATATTGACGATGGCGACTGCGTCGTCTTCAAGATGGAGAGCCACAACCACCCGTCCTATATCGAGCCCTATCAGGG TGCGGCAACCGGCGTCGGCGGCATCCTGCGTGACGTCTTCACCATGGGCGCACGCCCGATCGCCGCCATGAACGCCCTGC GTTTCGGTGCGCCGGATCATCCGAAGACCCGCCACCTCGTCGCCGGCGTCGTCGCCGGTGTCGGCGGTTACGGCAACTCC TTCGGTGTGCCGACAGTTGGCGGCGAAGTGGAATTCGACCCGCGTTATAACGGCAATATCCTCGTCAACGCCTTTGCCGC CGGTCTTGCCAAGTCCAATGCGATCTTCCTCTCGGAAGCCAAGGGCGTCGGCCTGCCGGTCGTTTATCTCGGTGCAAAGA CCGGCCGCGACGGCGTTGGCGGCGCGACCATGGCCTCTGCCGAATTCGACGAGTCCATCGAAGAAAAGCGCCCGACGGTT CAAGTCGGCGACCCCTTCACCGAAAAGTGCCTGCTGGAAGCCTGCCTTGAGCTGATGAAGACCGGTGCGGTCATCGCCAT TCAGGACATGGGTGCCGCCGGCCTCACCTGCTCCGCCGTCGAAATGGGCGCCAAGGGTGATCTCGGCATCGAACTGGACC TGAACGCCGTGCCGGTGCGCGAAGAGCGCATGACGGCTTACGAAATGATGCTGTCGGAAAGCCAGGAGCGCATGCTCATG GTTCTCGAGCCCTCCAAGGAAGAAGTCGCCAAGGCGATCTTCGTCAAATGGGGTCTGGACTTCGCCATCGTCGGCAAGAC CACCGACGACCTGCGCTTCCGCGTGCTGCACAATGGCGAAGAAGTCGCCAACCTGCCGATCAAGGAACTCGGCGACGAGG CCCCCGAATACGACCGCCCGTGGACGCCAGCCAAGGTGCCCGCAGCGCTTTCGGAAACCGACATCCCCGAAGCCGACATT GCCGATGCGCTGGTGTCGCTCGTTGGTTCGGCCAACAACTCCTCGCGCCGCTGGGTTTACGAACAGTATGACACGCTGAT CCAGGGCAATTCCCTGCAGCTGCCGGGCGGTGATGCCGGCGTGGTGCGCGTCGAAGGCCATGACAAGAAGGCGCTCGCTT TCTCCTCCGACGTGACCCCGCGTTATGTCGAGGCCGATGCCTTCGAAGGCGGCAAGCAGGCGGTCGCCGAATGCTGGCGC AACATTACCGCAACTGGTGCTCTGCCGCTGGCGGCCACCGACAACCTCAATTTCGGCAATCCGGAAAAGCCCGAAATCAT GAGCCAGCTGGTCCATGCCATCAAGGGCATCGGCGAGGCCTGCCGCGTGCTGGAATTCCCGATCGTTTCCGGCAACGTCT CGCTCTACAACGAGACCAATGGTCAGGCGATCCTGCCCACCCCCACCATCGGCGGCGTTGGCCTGCTGAAGGACTGGGGC CGCATGGCGCGCATCCGTTTCGCGGCTGCCGACGAGGTGGTACTCTTGGTTGGCGCACCTGCTGGCCTCGGCACCCACAT TGCCCAGTCGGTCTATATGCGTGATGTTCACGGCCGCACCGATGGCCCGGCGCCGCATGTCGATCTCATCGCCGAGAAGA AGAACGGCGATTTCGTCCGTGGTCTCATCACTGAAGGTCTCACCACCGCCGTTCACGATTGCTCCTCTGGCGGTCTGGCA CTCGCTGTTGCCGAAATGGCGATTTCATCCGGCATCGGCGCAACGATCGATGCGGTCGAAGGCCATAATCCGATCCTCAC CTTCTATGGCGAAGATCAGGCCCGTTACGTCCTGACCGTCAAGAAGTCCGATCTCGACAAGGTGCGGGCGGCGGCCAAGG CGGCCGGTGTTTCCTGCCCTCTTATTGGCACTACCGGTGGTTCCACCGTAAAGCTGGGCACGGCGCGCGCTGTCGAGATT AAAGAATTGCACTTGGCCTATGAATCGTGGTTCCCTCAGTTCATGGACGGCGAAACTTTGATTGCCGCAGAATGA
Upstream 100 bases:
>100_bases CAGCGTTTTGCCGGTAAAACTGCGCATTTTCCTGTCGCACGGAGAGGCCTCTTGCGCTAAAGAACCGGAAACTTTCCTCG GCTCGAACCGCGTGAGACCT
Downstream 100 bases:
>100_bases ATTAAGGAGAAACACCATGCCCATGAAACCCGGCGACATTGAAGACATGATTAAGGCGGGAATTCCCGGGGCAAAGGTCA CGATCCGCGATCTGGCCGGT
Product: phosphoribosylformylglycinamidine synthase II
Products: NA
Alternate protein names: Phosphoribosylformylglycinamidine synthase II; FGAM synthase II
Number of amino acids: Translated: 744; Mature: 743
Protein sequence:
>744_residues MSISNSIKITPELVASHGLKPDEYQRILDLIGREPSFTELGIFSAMWNEHCSYKSSKKWLKTLPTTGPRVIQGPGENAGV VDIDDGDCVVFKMESHNHPSYIEPYQGAATGVGGILRDVFTMGARPIAAMNALRFGAPDHPKTRHLVAGVVAGVGGYGNS FGVPTVGGEVEFDPRYNGNILVNAFAAGLAKSNAIFLSEAKGVGLPVVYLGAKTGRDGVGGATMASAEFDESIEEKRPTV QVGDPFTEKCLLEACLELMKTGAVIAIQDMGAAGLTCSAVEMGAKGDLGIELDLNAVPVREERMTAYEMMLSESQERMLM VLEPSKEEVAKAIFVKWGLDFAIVGKTTDDLRFRVLHNGEEVANLPIKELGDEAPEYDRPWTPAKVPAALSETDIPEADI ADALVSLVGSANNSSRRWVYEQYDTLIQGNSLQLPGGDAGVVRVEGHDKKALAFSSDVTPRYVEADAFEGGKQAVAECWR NITATGALPLAATDNLNFGNPEKPEIMSQLVHAIKGIGEACRVLEFPIVSGNVSLYNETNGQAILPTPTIGGVGLLKDWG RMARIRFAAADEVVLLVGAPAGLGTHIAQSVYMRDVHGRTDGPAPHVDLIAEKKNGDFVRGLITEGLTTAVHDCSSGGLA LAVAEMAISSGIGATIDAVEGHNPILTFYGEDQARYVLTVKKSDLDKVRAAAKAAGVSCPLIGTTGGSTVKLGTARAVEI KELHLAYESWFPQFMDGETLIAAE
Sequences:
>Translated_744_residues MSISNSIKITPELVASHGLKPDEYQRILDLIGREPSFTELGIFSAMWNEHCSYKSSKKWLKTLPTTGPRVIQGPGENAGV VDIDDGDCVVFKMESHNHPSYIEPYQGAATGVGGILRDVFTMGARPIAAMNALRFGAPDHPKTRHLVAGVVAGVGGYGNS FGVPTVGGEVEFDPRYNGNILVNAFAAGLAKSNAIFLSEAKGVGLPVVYLGAKTGRDGVGGATMASAEFDESIEEKRPTV QVGDPFTEKCLLEACLELMKTGAVIAIQDMGAAGLTCSAVEMGAKGDLGIELDLNAVPVREERMTAYEMMLSESQERMLM VLEPSKEEVAKAIFVKWGLDFAIVGKTTDDLRFRVLHNGEEVANLPIKELGDEAPEYDRPWTPAKVPAALSETDIPEADI ADALVSLVGSANNSSRRWVYEQYDTLIQGNSLQLPGGDAGVVRVEGHDKKALAFSSDVTPRYVEADAFEGGKQAVAECWR NITATGALPLAATDNLNFGNPEKPEIMSQLVHAIKGIGEACRVLEFPIVSGNVSLYNETNGQAILPTPTIGGVGLLKDWG RMARIRFAAADEVVLLVGAPAGLGTHIAQSVYMRDVHGRTDGPAPHVDLIAEKKNGDFVRGLITEGLTTAVHDCSSGGLA LAVAEMAISSGIGATIDAVEGHNPILTFYGEDQARYVLTVKKSDLDKVRAAAKAAGVSCPLIGTTGGSTVKLGTARAVEI KELHLAYESWFPQFMDGETLIAAE >Mature_743_residues SISNSIKITPELVASHGLKPDEYQRILDLIGREPSFTELGIFSAMWNEHCSYKSSKKWLKTLPTTGPRVIQGPGENAGVV DIDDGDCVVFKMESHNHPSYIEPYQGAATGVGGILRDVFTMGARPIAAMNALRFGAPDHPKTRHLVAGVVAGVGGYGNSF GVPTVGGEVEFDPRYNGNILVNAFAAGLAKSNAIFLSEAKGVGLPVVYLGAKTGRDGVGGATMASAEFDESIEEKRPTVQ VGDPFTEKCLLEACLELMKTGAVIAIQDMGAAGLTCSAVEMGAKGDLGIELDLNAVPVREERMTAYEMMLSESQERMLMV LEPSKEEVAKAIFVKWGLDFAIVGKTTDDLRFRVLHNGEEVANLPIKELGDEAPEYDRPWTPAKVPAALSETDIPEADIA DALVSLVGSANNSSRRWVYEQYDTLIQGNSLQLPGGDAGVVRVEGHDKKALAFSSDVTPRYVEADAFEGGKQAVAECWRN ITATGALPLAATDNLNFGNPEKPEIMSQLVHAIKGIGEACRVLEFPIVSGNVSLYNETNGQAILPTPTIGGVGLLKDWGR MARIRFAAADEVVLLVGAPAGLGTHIAQSVYMRDVHGRTDGPAPHVDLIAEKKNGDFVRGLITEGLTTAVHDCSSGGLAL AVAEMAISSGIGATIDAVEGHNPILTFYGEDQARYVLTVKKSDLDKVRAAAKAAGVSCPLIGTTGGSTVKLGTARAVEIK ELHLAYESWFPQFMDGETLIAAE
Specific function: Unknown
COG id: COG0046
COG function: function code F; Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FGAMS family
Homologues:
Organism=Homo sapiens, GI31657129, Length=334, Percent_Identity=26.6467065868263, Blast_Score=75, Evalue=2e-13, Organism=Escherichia coli, GI48994899, Length=778, Percent_Identity=24.1645244215938, Blast_Score=123, Evalue=5e-29, Organism=Caenorhabditis elegans, GI17553022, Length=440, Percent_Identity=23.6363636363636, Blast_Score=79, Evalue=9e-15, Organism=Saccharomyces cerevisiae, GI6321498, Length=798, Percent_Identity=22.1804511278195, Blast_Score=102, Evalue=3e-22, Organism=Drosophila melanogaster, GI24582111, Length=743, Percent_Identity=24.4952893674293, Blast_Score=100, Evalue=4e-21, Organism=Drosophila melanogaster, GI24582109, Length=743, Percent_Identity=24.4952893674293, Blast_Score=100, Evalue=4e-21, Organism=Drosophila melanogaster, GI17137292, Length=743, Percent_Identity=24.4952893674293, Blast_Score=100, Evalue=4e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PURL_AGRT5 (Q8UEB0)
Other databases:
- EMBL: AE007869 - PIR: AH2803 - PIR: H97582 - RefSeq: NP_354832.2 - ProteinModelPortal: Q8UEB0 - SMR: Q8UEB0 - STRING: Q8UEB0 - GeneID: 1133888 - GenomeReviews: AE007869_GR - KEGG: atu:Atu1850 - eggNOG: COG0046 - HOGENOM: HBG311214 - OMA: YGNSFGV - PhylomeDB: Q8UEB0 - ProtClustDB: PRK01213 - BioCyc: ATUM176299-1:ATU1850-MONOMER - GO: GO:0005737 - HAMAP: MF_00420 - InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR010074 - InterPro: IPR016188 - TIGRFAMs: TIGR01736
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C; SSF56042 AIR_synth_C; SSF55326 PurM_N-like
EC number: =6.3.5.3
Molecular weight: Translated: 79065; Mature: 78934
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSISNSIKITPELVASHGLKPDEYQRILDLIGREPSFTELGIFSAMWNEHCSYKSSKKWL CCCCCCEEECHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHH KTLPTTGPRVIQGPGENAGVVDIDDGDCVVFKMESHNHPSYIEPYQGAATGVGGILRDVF HHCCCCCCEEEECCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH TMGARPIAAMNALRFGAPDHPKTRHLVAGVVAGVGGYGNSFGVPTVGGEVEFDPRYNGNI HHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCE LVNAFAAGLAKSNAIFLSEAKGVGLPVVYLGAKTGRDGVGGATMASAEFDESIEEKRPTV EEEEHHHHHCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCEEECHHHHHHHHHCCCEE QVGDPFTEKCLLEACLELMKTGAVIAIQDMGAAGLTCSAVEMGAKGDLGIELDLNAVPVR EECCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEHHEECCCCCCCEEEEECCCCCCH EERMTAYEMMLSESQERMLMVLEPSKEEVAKAIFVKWGLDFAIVGKTTDDLRFRVLHNGE HHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHEECCCEEEEECCCCCEEEEEEECCC EVANLPIKELGDEAPEYDRPWTPAKVPAALSETDIPEADIADALVSLVGSANNSSRRWVY HHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEH EQYDTLIQGNSLQLPGGDAGVVRVEGHDKKALAFSSDVTPRYVEADAFEGGKQAVAECWR HHHHHHCCCCEEECCCCCCCEEEEECCCCEEEEECCCCCCCEEECCCCCCHHHHHHHHHH NITATGALPLAATDNLNFGNPEKPEIMSQLVHAIKGIGEACRVLEFPIVSGNVSLYNETN CCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECEEEECCEEEEECCC GQAILPTPTIGGVGLLKDWGRMARIRFAAADEVVLLVGAPAGLGTHIAQSVYMRDVHGRT CCEEECCCCCCCCHHHHHHHHHHEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHCCCC DGPAPHVDLIAEKKNGDFVRGLITEGLTTAVHDCSSGGLALAVAEMAISSGIGATIDAVE CCCCCCEEEEEECCCCCHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEC GHNPILTFYGEDQARYVLTVKKSDLDKVRAAAKAAGVSCPLIGTTGGSTVKLGTARAVEI CCCCEEEEEECCCEEEEEEEECCCHHHHHHHHHHCCCCCCEEECCCCCEEEECCCCEEEH KELHLAYESWFPQFMDGETLIAAE HHHHHHHHHHCCHHCCCCEEEEEC >Mature Secondary Structure SISNSIKITPELVASHGLKPDEYQRILDLIGREPSFTELGIFSAMWNEHCSYKSSKKWL CCCCCEEECHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHH KTLPTTGPRVIQGPGENAGVVDIDDGDCVVFKMESHNHPSYIEPYQGAATGVGGILRDVF HHCCCCCCEEEECCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH TMGARPIAAMNALRFGAPDHPKTRHLVAGVVAGVGGYGNSFGVPTVGGEVEFDPRYNGNI HHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCE LVNAFAAGLAKSNAIFLSEAKGVGLPVVYLGAKTGRDGVGGATMASAEFDESIEEKRPTV EEEEHHHHHCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCEEECHHHHHHHHHCCCEE QVGDPFTEKCLLEACLELMKTGAVIAIQDMGAAGLTCSAVEMGAKGDLGIELDLNAVPVR EECCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEHHEECCCCCCCEEEEECCCCCCH EERMTAYEMMLSESQERMLMVLEPSKEEVAKAIFVKWGLDFAIVGKTTDDLRFRVLHNGE HHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHEECCCEEEEECCCCCEEEEEEECCC EVANLPIKELGDEAPEYDRPWTPAKVPAALSETDIPEADIADALVSLVGSANNSSRRWVY HHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEH EQYDTLIQGNSLQLPGGDAGVVRVEGHDKKALAFSSDVTPRYVEADAFEGGKQAVAECWR HHHHHHCCCCEEECCCCCCCEEEEECCCCEEEEECCCCCCCEEECCCCCCHHHHHHHHHH NITATGALPLAATDNLNFGNPEKPEIMSQLVHAIKGIGEACRVLEFPIVSGNVSLYNETN CCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECEEEECCEEEEECCC GQAILPTPTIGGVGLLKDWGRMARIRFAAADEVVLLVGAPAGLGTHIAQSVYMRDVHGRT CCEEECCCCCCCCHHHHHHHHHHEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHCCCC DGPAPHVDLIAEKKNGDFVRGLITEGLTTAVHDCSSGGLALAVAEMAISSGIGATIDAVE CCCCCCEEEEEECCCCCHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEC GHNPILTFYGEDQARYVLTVKKSDLDKVRAAAKAAGVSCPLIGTTGGSTVKLGTARAVEI CCCCEEEEEECCCEEEEEEEECCCHHHHHHHHHHCCCCCCEEECCCCCEEEECCCCEEEH KELHLAYESWFPQFMDGETLIAAE HHHHHHHHHHCCHHCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194