Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15889154
Identifier: 15889154
GI number: 15889154
Start: 1833841
End: 1834089
Strand: Direct
Name: 15889154
Synonym: Atu1853
Alternate gene names: NA
Gene position: 1833841-1834089 (Clockwise)
Preceding gene: 159184946
Following gene: 159184947
Centisome position: 64.54
GC content: 60.24
Gene sequence:
>249_bases TTGTCTGGCATCGTCGATCAGTTGCTCAATGGCGTCGTCAAGGGCGCTCTGGCTGAAGTTCTCACCAAGACCGGTATTCG CAAGACGCGCCGCGCGCGCCGGACGAAAAACACCGGCTCCCTAACCGGTGGTATCGTTGGTTCTGTTCTTGAGGCCGCAC TCAACGCCGCCGTCAAGCCCAAGCCGGCCAGGAAGCAGGTAAGCAAAAGGCGCACCGCCGCTTCCCGCAGCAGGCAGCGG TATAAATAA
Upstream 100 bases:
>100_bases TCAGGCTGGAGACACCCGAAAGGATCGCTTGATACAGTGGGCGATGCACGTATAGTAAAAATCGCGACGGAAATATGATT TATTTGGTGGTGGGGGAATT
Downstream 100 bases:
>100_bases AAAGCAGCAGGCCGGATTTAGTCTGTCATGCCATGCCACGCAGACGTATTTTTTACGCTTTCCGGGTGGAAATCGCGCCG CGACATGTTATTTAGAGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MSGIVDQLLNGVVKGALAEVLTKTGIRKTRRARRTKNTGSLTGGIVGSVLEAALNAAVKPKPARKQVSKRRTAASRSRQR YK
Sequences:
>Translated_82_residues MSGIVDQLLNGVVKGALAEVLTKTGIRKTRRARRTKNTGSLTGGIVGSVLEAALNAAVKPKPARKQVSKRRTAASRSRQR YK >Mature_81_residues SGIVDQLLNGVVKGALAEVLTKTGIRKTRRARRTKNTGSLTGGIVGSVLEAALNAAVKPKPARKQVSKRRTAASRSRQRY K
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8800; Mature: 8669
Theoretical pI: Translated: 12.60; Mature: 12.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGIVDQLLNGVVKGALAEVLTKTGIRKTRRARRTKNTGSLTGGIVGSVLEAALNAAVKP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC KPARKQVSKRRTAASRSRQRYK CHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SGIVDQLLNGVVKGALAEVLTKTGIRKTRRARRTKNTGSLTGGIVGSVLEAALNAAVKP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC KPARKQVSKRRTAASRSRQRYK CHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA