Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184944
Identifier: 159184944
GI number: 159184944
Start: 1824104
End: 1824667
Strand: Direct
Name: 159184944
Synonym: Atu1842
Alternate gene names: NA
Gene position: 1824104-1824667 (Clockwise)
Preceding gene: 159184943
Following gene: 15889145
Centisome position: 64.19
GC content: 63.48
Gene sequence:
>564_bases ATGAAAGTTTCAGACGTAGATATCCTCATCGTACCCGGTTACACCAATTCCGGCCCCGACCACTGGCAGACCCGCTGGGA GCGCAAGCTATCCACCGCGCGCCGGGTCGAGCAGGCGGAGTGGACCAAGCCCGTGAAGGCAGACTGGGTGGCGCGGCTGG TTGAAGAGGTGAACGCCGCTACCAAGCCCGTCGTGCTGGTTGCCCATTCGCTCGGTGTGCCGACCGTGATCCATGCCTTG CCTGAGATCGCCCATAAGGTCGTAGGCGCCGTTTTTGTTGCCCCGCCCGATGTCGCCAATCCGGATATCCGGCCGAAACA CCTGATGACCTTCGGCCCCTACCCGCGCGATCCACTGCCGTTTCCGTCCATCACCATCGCCAGCCGCAACGATCCTTTCG GCACTTACGAACATGCCGACGACATCGCCAGCGCCTGGGGTTCCATGCTGGTGGATGCCGGCATGTCCGGCCACATCAAC GCCGAGTCCGGCCATGGCCCGTGGCCCGAAGGCGGCATGGTGTTTGCCCAGTTCCTCAGCCGCCTGAAGACGCCCGAGAC CTGA
Upstream 100 bases:
>100_bases ATCTTCACCCGTGTCTTCGGCAAGGCCTGATCCAGAACGCGGATAAGTTAATGCTGTCGCGGTCTTGATCGCGACGGCAT CAAAGCACAGATATGGGCGC
Downstream 100 bases:
>100_bases CGATCCGGGCAAAGGCGCACCATGTCATGCCTTGGCCCTACCATACCGGGTGTTGTTGCTTCATGGCCCGACACAAGAAT TGAAGGGAAGATCAGCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MKVSDVDILIVPGYTNSGPDHWQTRWERKLSTARRVEQAEWTKPVKADWVARLVEEVNAATKPVVLVAHSLGVPTVIHAL PEIAHKVVGAVFVAPPDVANPDIRPKHLMTFGPYPRDPLPFPSITIASRNDPFGTYEHADDIASAWGSMLVDAGMSGHIN AESGHGPWPEGGMVFAQFLSRLKTPET
Sequences:
>Translated_187_residues MKVSDVDILIVPGYTNSGPDHWQTRWERKLSTARRVEQAEWTKPVKADWVARLVEEVNAATKPVVLVAHSLGVPTVIHAL PEIAHKVVGAVFVAPPDVANPDIRPKHLMTFGPYPRDPLPFPSITIASRNDPFGTYEHADDIASAWGSMLVDAGMSGHIN AESGHGPWPEGGMVFAQFLSRLKTPET >Mature_187_residues MKVSDVDILIVPGYTNSGPDHWQTRWERKLSTARRVEQAEWTKPVKADWVARLVEEVNAATKPVVLVAHSLGVPTVIHAL PEIAHKVVGAVFVAPPDVANPDIRPKHLMTFGPYPRDPLPFPSITIASRNDPFGTYEHADDIASAWGSMLVDAGMSGHIN AESGHGPWPEGGMVFAQFLSRLKTPET
Specific function: Unknown
COG id: COG3545
COG function: function code R; Predicted esterase of the alpha/beta hydrolase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20457; Mature: 20457
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00136 SUBTILASE_ASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVSDVDILIVPGYTNSGPDHWQTRWERKLSTARRVEQAEWTKPVKADWVARLVEEVNAA CCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC TKPVVLVAHSLGVPTVIHALPEIAHKVVGAVFVAPPDVANPDIRPKHLMTFGPYPRDPLP CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEEECCCCCCCCC FPSITIASRNDPFGTYEHADDIASAWGSMLVDAGMSGHINAESGHGPWPEGGMVFAQFLS CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHH RLKTPET HHCCCCC >Mature Secondary Structure MKVSDVDILIVPGYTNSGPDHWQTRWERKLSTARRVEQAEWTKPVKADWVARLVEEVNAA CCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC TKPVVLVAHSLGVPTVIHALPEIAHKVVGAVFVAPPDVANPDIRPKHLMTFGPYPRDPLP CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEEECCCCCCCCC FPSITIASRNDPFGTYEHADDIASAWGSMLVDAGMSGHINAESGHGPWPEGGMVFAQFLS CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHH RLKTPET HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA