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The map label for this gene is yieP [H]

Identifier: 159184917

GI number: 159184917

Start: 1774345

End: 1775082

Strand: Reverse

Name: yieP [H]

Synonym: Atu1788

Alternate gene names: 159184917

Gene position: 1775082-1774345 (Counterclockwise)

Preceding gene: 159184918

Following gene: 15889091

Centisome position: 62.47

GC content: 57.59

Gene sequence:

>738_bases
ATGCTCGATGCGGCGATCGGTTTTCGAAAGCTGCGGACAAATCATGCACAGGTCGTTCACAAGCTCGGTCTCGATATCGT
CTCCGGCACCTTCAAGACGGGTGACATCCTGCCGGGTGACGCCGATTTGATGGAACGGCTGAAAGTATCCCGCACGGTGC
TTCGCGAGGCGATGAAGACGCTCACCGCCAAGGGCATGATCTCCCCCAAGGCGCGCATCGGCACTCGGGTGACGGAGCGA
GAAAGCTGGAACATGTTCGACAGCGAGGTGCTGCTCTGGCACTTCGAGGCGGGTGTCAGCGAGGAATTCCTGCTGCATCT
CTACGATATCCGCCAGGCTTTCGAACCCTATGGTGCGGGTCTTGCAGCCACCAGAGCAAAAGATACCGATATTGCGAGGC
TCGTCGCTTACGCCAACGAGATGGGCAACACTGCCTATTCCAAGGAAAAGCGGGCGATTGCGGACATGAATTTTCATGTC
CTTATTACCGAAATGTCCGGCAACCCGTTCATGCGCACCGTTGGTTCGTTGATCAAGGCGGCGCTGGCGGGCATTTTCCG
GATGAGCAACCCGGAAGCCGATCCCAACGAGATTTCCGACGTGTCTGCCTCTCACCTGCGGCTCGTCGAAGCGTTTCGCC
TGCGCGATGAGGTTGCGGCCCGGCACGAGATGGAAAGACTGATTGAAAACGGCCGTCAACAGATACTCGAATTCACGGCC
CGAAACTCCCGCAGATAG

Upstream 100 bases:

>100_bases
CTTGATGTTTTTCACTATAATCTGACTTGAGATACACACGTCAGGCGCGATTTTTTGAAATCGCCAGCCGAACGGAAGGA
CATGACATTTGCAGCGCGGA

Downstream 100 bases:

>100_bases
ATCATGCCAGCCTGCCGCTGATCACGTTTGATGAAAATCGGCGTGGAAATTTGGTGGAGATTTGCATGGTTTCTTAAGTG
GGGCGCCGTTATAGCAGTGC

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MLDAAIGFRKLRTNHAQVVHKLGLDIVSGTFKTGDILPGDADLMERLKVSRTVLREAMKTLTAKGMISPKARIGTRVTER
ESWNMFDSEVLLWHFEAGVSEEFLLHLYDIRQAFEPYGAGLAATRAKDTDIARLVAYANEMGNTAYSKEKRAIADMNFHV
LITEMSGNPFMRTVGSLIKAALAGIFRMSNPEADPNEISDVSASHLRLVEAFRLRDEVAARHEMERLIENGRQQILEFTA
RNSRR

Sequences:

>Translated_245_residues
MLDAAIGFRKLRTNHAQVVHKLGLDIVSGTFKTGDILPGDADLMERLKVSRTVLREAMKTLTAKGMISPKARIGTRVTER
ESWNMFDSEVLLWHFEAGVSEEFLLHLYDIRQAFEPYGAGLAATRAKDTDIARLVAYANEMGNTAYSKEKRAIADMNFHV
LITEMSGNPFMRTVGSLIKAALAGIFRMSNPEADPNEISDVSASHLRLVEAFRLRDEVAARHEMERLIENGRQQILEFTA
RNSRR
>Mature_245_residues
MLDAAIGFRKLRTNHAQVVHKLGLDIVSGTFKTGDILPGDADLMERLKVSRTVLREAMKTLTAKGMISPKARIGTRVTER
ESWNMFDSEVLLWHFEAGVSEEFLLHLYDIRQAFEPYGAGLAATRAKDTDIARLVAYANEMGNTAYSKEKRAIADMNFHV
LITEMSGNPFMRTVGSLIKAALAGIFRMSNPEADPNEISDVSASHLRLVEAFRLRDEVAARHEMERLIENGRQQILEFTA
RNSRR

Specific function: Repressor For The Dgorkat Operon. Binds D-Galactonate As An Inducer. [C]

COG id: COG2186

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI48994961, Length=168, Percent_Identity=38.6904761904762, Blast_Score=117, Evalue=9e-28,
Organism=Escherichia coli, GI48994955, Length=223, Percent_Identity=28.2511210762332, Blast_Score=96, Evalue=2e-21,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 27551; Mature: 27551

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDAAIGFRKLRTNHAQVVHKLGLDIVSGTFKTGDILPGDADLMERLKVSRTVLREAMKT
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LTAKGMISPKARIGTRVTERESWNMFDSEVLLWHFEAGVSEEFLLHLYDIRQAFEPYGAG
HHHCCCCCCHHHHCCCHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCC
LAATRAKDTDIARLVAYANEMGNTAYSKEKRAIADMNFHVLITEMSGNPFMRTVGSLIKA
HHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHH
ALAGIFRMSNPEADPNEISDVSASHLRLVEAFRLRDEVAARHEMERLIENGRQQILEFTA
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNSRR
HCCCC
>Mature Secondary Structure
MLDAAIGFRKLRTNHAQVVHKLGLDIVSGTFKTGDILPGDADLMERLKVSRTVLREAMKT
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LTAKGMISPKARIGTRVTERESWNMFDSEVLLWHFEAGVSEEFLLHLYDIRQAFEPYGAG
HHHCCCCCCHHHHCCCHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCC
LAATRAKDTDIARLVAYANEMGNTAYSKEKRAIADMNFHVLITEMSGNPFMRTVGSLIKA
HHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHH
ALAGIFRMSNPEADPNEISDVSASHLRLVEAFRLRDEVAARHEMERLIENGRQQILEFTA
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNSRR
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]