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The map label for this gene is med [H]

Identifier: 159184918

GI number: 159184918

Start: 1775296

End: 1776369

Strand: Reverse

Name: med [H]

Synonym: Atu1789

Alternate gene names: 159184918

Gene position: 1776369-1775296 (Counterclockwise)

Preceding gene: 15889094

Following gene: 159184917

Centisome position: 62.51

GC content: 60.61

Gene sequence:

>1074_bases
ATGAAAAAACTGGTCATCGCACTTGCCGCGTCCGTCGCGGCGCTCGGAGGCGTCGTTTCCTCCGCTGAAGCCGCCGACGC
CAAGAAGGTCTGCTTCATCTATGTCGGCAGCCGCACCGATGGCGGCTGGACGCAGGCGCATGAAATCGGTCGCGAAGAGC
TGCAGAAGCATTTCGGCGACAAGATCGAAACGCCTTTCCTCGAAAGCGTTCCAGAAGGCCCGGATGCCGAGCGCGCCATC
GAGCGTATGGCCCGTTCCGGTTGCGAACTGGTGTTCACCACCTCCTTCGGCTTCATGGATGCGACCGTGAAGGTGGCCCA
GAAGTTCCCCAAGGTGAAGTTCGAGCACGCCACCGGCTTCAAGACGGCCGAAAACGTCGCGACCTATAATTCGCGTTTCT
ATGAAGGCCGCTACATTCAGGGCCAGATCGCCGCGAAGATGTCCAAGAAGGGTCTCGCCGGTTACATCGCCTCCTTCCCG
ATCCCGGAAGTGGTGATGGGCATTGACGCCTTCGTTCTCGGCGCGCAGTCGGTGAACCCGGACTTCAAGCTCAAGGTCGT
CTGGGCCAATACCTGGTTCGACCCCGGCAAGGAAGCCGATGCTGCCAAGGCTCTGATCGACCAGGGCGTCGATATCCTGA
CGCAGCACACCGACACGACGGCACCGATGCAGGTTGCAGCGGAACGCGGCATCAAGGCTTTCGGTCAGGCTTCCGACATG
ATCGCGGCCGGCCCGCAGACGCAGCTGACCGCCATCAAGGACACTTGGGGTGCCTATTACATCAAGCGCACGCAGGCGCT
TCTCGATGGTACCTGGAAGTCCGAATCCGTCTGGGACGGCCTGAAGGACGGCATCCTGACCATGGCGCCCTACACCAACA
TGCCTGACGACGTGAAAAAGATGGCTGAGGAAACCGAAGCCAAGATCAAGTCGGGCGAGCTGCACCCCTTCACCGGCCCG
GTGAAGAAGCAGGACGGCTCGGAATGGCTGAAGGCGGGTGAAAAGGCCGAAGACAAGGTTCTGCTCGGCCTCAACTTCTA
CGTTGCCGGCGTGGACGACAAGCTGCCGCAATAA

Upstream 100 bases:

>100_bases
GCCGCACGACCTTGATCAACACACCGGCATCGCTGGGCAAATCCTTCGTGCCGGACAGGTGAAGAAGAATCCTCAAGTCT
CCAAACCAACAGGGGTAAAA

Downstream 100 bases:

>100_bases
TGCGGATTCTCTTCCATTACTGATGAAAGGCCGCACATGAAACTCATGTGCGGCCTTGCTTATTTTCATACGTTTTATTG
TGCGGATGAAGTTTGTCTTT

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MKKLVIALAASVAALGGVVSSAEAADAKKVCFIYVGSRTDGGWTQAHEIGREELQKHFGDKIETPFLESVPEGPDAERAI
ERMARSGCELVFTTSFGFMDATVKVAQKFPKVKFEHATGFKTAENVATYNSRFYEGRYIQGQIAAKMSKKGLAGYIASFP
IPEVVMGIDAFVLGAQSVNPDFKLKVVWANTWFDPGKEADAAKALIDQGVDILTQHTDTTAPMQVAAERGIKAFGQASDM
IAAGPQTQLTAIKDTWGAYYIKRTQALLDGTWKSESVWDGLKDGILTMAPYTNMPDDVKKMAEETEAKIKSGELHPFTGP
VKKQDGSEWLKAGEKAEDKVLLGLNFYVAGVDDKLPQ

Sequences:

>Translated_357_residues
MKKLVIALAASVAALGGVVSSAEAADAKKVCFIYVGSRTDGGWTQAHEIGREELQKHFGDKIETPFLESVPEGPDAERAI
ERMARSGCELVFTTSFGFMDATVKVAQKFPKVKFEHATGFKTAENVATYNSRFYEGRYIQGQIAAKMSKKGLAGYIASFP
IPEVVMGIDAFVLGAQSVNPDFKLKVVWANTWFDPGKEADAAKALIDQGVDILTQHTDTTAPMQVAAERGIKAFGQASDM
IAAGPQTQLTAIKDTWGAYYIKRTQALLDGTWKSESVWDGLKDGILTMAPYTNMPDDVKKMAEETEAKIKSGELHPFTGP
VKKQDGSEWLKAGEKAEDKVLLGLNFYVAGVDDKLPQ
>Mature_357_residues
MKKLVIALAASVAALGGVVSSAEAADAKKVCFIYVGSRTDGGWTQAHEIGREELQKHFGDKIETPFLESVPEGPDAERAI
ERMARSGCELVFTTSFGFMDATVKVAQKFPKVKFEHATGFKTAENVATYNSRFYEGRYIQGQIAAKMSKKGLAGYIASFP
IPEVVMGIDAFVLGAQSVNPDFKLKVVWANTWFDPGKEADAAKALIDQGVDILTQHTDTTAPMQVAAERGIKAFGQASDM
IAAGPQTQLTAIKDTWGAYYIKRTQALLDGTWKSESVWDGLKDGILTMAPYTNMPDDVKKMAEETEAKIKSGELHPFTGP
VKKQDGSEWLKAGEKAEDKVLLGLNFYVAGVDDKLPQ

Specific function: Positive activator of the comK gene [H]

COG id: COG1744

COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BMP lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003760 [H]

Pfam domain/function: PF02608 Bmp [H]

EC number: NA

Molecular weight: Translated: 38788; Mature: 38788

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLVIALAASVAALGGVVSSAEAADAKKVCFIYVGSRTDGGWTQAHEIGREELQKHFGD
CCHHHHHHHHHHHHHHHHHHCHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCC
KIETPFLESVPEGPDAERAIERMARSGCELVFTTSFGFMDATVKVAQKFPKVKFEHATGF
CCCCCHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCEEECCCCC
KTAENVATYNSRFYEGRYIQGQIAAKMSKKGLAGYIASFPIPEVVMGIDAFVLGAQSVNP
CHHHHHHHHCCCEECCCEEEHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHEECCCCCCC
DFKLKVVWANTWFDPGKEADAAKALIDQGVDILTQHTDTTAPMQVAAERGIKAFGQASDM
CEEEEEEEEECCCCCCCCHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCC
IAAGPQTQLTAIKDTWGAYYIKRTQALLDGTWKSESVWDGLKDGILTMAPYTNMPDDVKK
EECCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEECCCCCCCHHHHH
MAEETEAKIKSGELHPFTGPVKKQDGSEWLKAGEKAEDKVLLGLNFYVAGVDDKLPQ
HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEEEEEEEEECCCCCCCC
>Mature Secondary Structure
MKKLVIALAASVAALGGVVSSAEAADAKKVCFIYVGSRTDGGWTQAHEIGREELQKHFGD
CCHHHHHHHHHHHHHHHHHHCHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCC
KIETPFLESVPEGPDAERAIERMARSGCELVFTTSFGFMDATVKVAQKFPKVKFEHATGF
CCCCCHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCEEECCCCC
KTAENVATYNSRFYEGRYIQGQIAAKMSKKGLAGYIASFPIPEVVMGIDAFVLGAQSVNP
CHHHHHHHHCCCEECCCEEEHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHEECCCCCCC
DFKLKVVWANTWFDPGKEADAAKALIDQGVDILTQHTDTTAPMQVAAERGIKAFGQASDM
CEEEEEEEEECCCCCCCCHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCC
IAAGPQTQLTAIKDTWGAYYIKRTQALLDGTWKSESVWDGLKDGILTMAPYTNMPDDVKK
EECCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEECCCCCCCHHHHH
MAEETEAKIKSGELHPFTGPVKKQDGSEWLKAGEKAEDKVLLGLNFYVAGVDDKLPQ
HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9335269; 9384377 [H]