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The map label for this gene is nifU [H]

Identifier: 159184897

GI number: 159184897

Start: 1735576

End: 1736022

Strand: Reverse

Name: nifU [H]

Synonym: Atu1748

Alternate gene names: 159184897

Gene position: 1736022-1735576 (Counterclockwise)

Preceding gene: 15889056

Following gene: 15889051

Centisome position: 61.09

GC content: 58.39

Gene sequence:

>447_bases
ATGGACGATATCTACAATAATCGCATTCTGGAATTTGCCGGGAATATCCCATTGACGGGAGTTCTCGATGATGCCGATGC
CAGCGCTGAAAAACACTCGCGGTTATGCGGCTCTAAGCTCAAGGTCTATCTGAAGGTCGAGGACGGCACCGTGACGGCTT
TTTCGCATGAAGTCCGTGCATGCGCACTGGGGCAGGCCTCGGCCTCCATCATGGCGCATCACATTGTTGGCGCTTCCAGC
GGCGAAATCCGGCAGGCGCGGGAAGACATGCTCGCCATGCTGAAACAAGATGGCGAGGGACCGACGGGCCGTTTTGAGGA
TATGCGGGTACTTTTGCCGGTCAGAGACTTCAAGGCACGCCACGCGTCCACCATGCTGACCTTCGAGGCGGTGGTCGATG
CGCTCGACCAGATCGAAGGCCGGCCGGCTCTCAACGTCGCGGGTTAG

Upstream 100 bases:

>100_bases
ATGAGAACGAAGGGCAGAAAAGCATCACTGCGACAAACGCTGTGTTTGAAAAATCTGACCTGTCCCGTTTTGGGCATTTT
TGAGCGCGCCGGACACTTCG

Downstream 100 bases:

>100_bases
CCGATGTGCGGCGAACCGGGCTGCCGGCATGAGCAGACAGCGGTGAAAGCCGGGCGATCCCGCAATTGGGCGGGCAGCTT
TGCGAAGACACCGGGACGGC

Product: NIFU-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MDDIYNNRILEFAGNIPLTGVLDDADASAEKHSRLCGSKLKVYLKVEDGTVTAFSHEVRACALGQASASIMAHHIVGASS
GEIRQAREDMLAMLKQDGEGPTGRFEDMRVLLPVRDFKARHASTMLTFEAVVDALDQIEGRPALNVAG

Sequences:

>Translated_148_residues
MDDIYNNRILEFAGNIPLTGVLDDADASAEKHSRLCGSKLKVYLKVEDGTVTAFSHEVRACALGQASASIMAHHIVGASS
GEIRQAREDMLAMLKQDGEGPTGRFEDMRVLLPVRDFKARHASTMLTFEAVVDALDQIEGRPALNVAG
>Mature_148_residues
MDDIYNNRILEFAGNIPLTGVLDDADASAEKHSRLCGSKLKVYLKVEDGTVTAFSHEVRACALGQASASIMAHHIVGASS
GEIRQAREDMLAMLKQDGEGPTGRFEDMRVLLPVRDFKARHASTMLTFEAVVDALDQIEGRPALNVAG

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (Potential) [H]

COG id: COG0822

COG function: function code C; NifU homolog involved in Fe-S cluster formation

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002871
- InterPro:   IPR011341 [H]

Pfam domain/function: PF01592 NifU_N [H]

EC number: NA

Molecular weight: Translated: 16012; Mature: 16012

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDIYNNRILEFAGNIPLTGVLDDADASAEKHSRLCGSKLKVYLKVEDGTVTAFSHEVRA
CCCCCCCCCEEECCCCCCEEEECCCCCCHHHHHHHCCCEEEEEEEECCCEEEEEHHHHHH
CALGQASASIMAHHIVGASSGEIRQAREDMLAMLKQDGEGPTGRFEDMRVLLPVRDFKAR
HHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECHHHHHH
HASTMLTFEAVVDALDQIEGRPALNVAG
HHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MDDIYNNRILEFAGNIPLTGVLDDADASAEKHSRLCGSKLKVYLKVEDGTVTAFSHEVRA
CCCCCCCCCEEECCCCCCEEEECCCCCCHHHHHHHCCCEEEEEEEECCCEEEEEHHHHHH
CALGQASASIMAHHIVGASSGEIRQAREDMLAMLKQDGEGPTGRFEDMRVLLPVRDFKAR
HHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECHHHHHH
HASTMLTFEAVVDALDQIEGRPALNVAG
HHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]