Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is gutQ [C]
Identifier: 15889056
GI number: 15889056
Start: 1738623
End: 1739057
Strand: Reverse
Name: gutQ [C]
Synonym: Atu1752
Alternate gene names: 15889056
Gene position: 1739057-1738623 (Counterclockwise)
Preceding gene: 15889057
Following gene: 159184897
Centisome position: 61.2
GC content: 60.69
Gene sequence:
>435_bases ATGGCAACATTCGTAAAGGATCTTCTCGACCGCAAGGGCCGGGATGTCGTGACTGTCGGTCCCGACGTCAGCATCGGTGA GGCGGCGGGCACGCTGCATGCGCACAAGATCGGTGCCGTCGTCGTGACAGACGCCGATGGTGTGGTTCTCGGCATCTTCA CCGAGCGCGATCTCGTGAAGGCCGTTGCAGGCCAGGGTGCGGCTTCCCTTCAGCAGTCCGTCTCCGTCGCCATGACCAAG AATGTGGTGCGCTGCCAGCATAATTCCACCACCGATCAGCTGATGGAAATCATGACGGGCGGACGCTTCAGGCATGTCCC GGTTGAAGAAAATGGCCGCCTTGCCGGCATCATCTCCATCGGCGACGTGGTGAAGGCGCGGATCGGCGAAATCGAGGCCG AGGCCGAGCATATCAAGGCCTATATTGCCGGATGA
Upstream 100 bases:
>100_bases CGGGATTGCATTCACGCGGGCCTCAGCGCACCATACCGCATGATTTGCAACCGCCGGGGGAGACTGCGGCACTGCAAATC GCTGCAAAGAGGAGGAAGGC
Downstream 100 bases:
>100_bases TCCCATTTGTCATGTAAGGTGGGTTCTGGCGGGGCATTCCGACGAGGAACTGACACGGTGAGGAGGCGAGGGTCTCGCCG TCAGCGCCGGAATGCCTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: ORF3 [H]
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAVAGQGAASLQQSVSVAMTK NVVRCQHNSTTDQLMEIMTGGRFRHVPVEENGRLAGIISIGDVVKARIGEIEAEAEHIKAYIAG
Sequences:
>Translated_144_residues MATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAVAGQGAASLQQSVSVAMTK NVVRCQHNSTTDQLMEIMTGGRFRHVPVEENGRLAGIISIGDVVKARIGEIEAEAEHIKAYIAG >Mature_143_residues ATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAVAGQGAASLQQSVSVAMTKN VVRCQHNSTTDQLMEIMTGGRFRHVPVEENGRLAGIISIGDVVKARIGEIEAEAEHIKAYIAG
Specific function: Not Known. [C]
COG id: COG0517
COG function: function code R; FOG: CBS domain
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 [H]
Pfam domain/function: PF00571 CBS [H]
EC number: NA
Molecular weight: Translated: 15145; Mature: 15013
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVK CCHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEEEEEEEEECCCCEEEEEECCHHHHH AVAGQGAASLQQSVSVAMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEENGRLAGIISI HHHCCCHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHCCCCEEECCCCCCCCEEEEEEH GDVVKARIGEIEAEAEHIKAYIAG HHHHHHHHCCCHHHHHHEEEEECC >Mature Secondary Structure ATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVK CHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEEEEEEEEECCCCEEEEEECCHHHHH AVAGQGAASLQQSVSVAMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEENGRLAGIISI HHHCCCHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHCCCCEEECCCCCCCCEEEEEEH GDVVKARIGEIEAEAEHIKAYIAG HHHHHHHHCCCHHHHHHEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA