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The map label for this gene is yidD [C]

Identifier: 15889051

GI number: 15889051

Start: 1735213

End: 1735572

Strand: Reverse

Name: yidD [C]

Synonym: Atu1747

Alternate gene names: 15889051

Gene position: 1735572-1735213 (Counterclockwise)

Preceding gene: 159184897

Following gene: 159185421

Centisome position: 61.08

GC content: 64.44

Gene sequence:

>360_bases
ATGTGCGGCGAACCGGGCTGCCGGCATGAGCAGACAGCGGTGAAAGCCGGGCGATCCCGCAATTGGGCGGGCAGCTTTGC
GAAGACACCGGGACGGCTTTTCGGCGTCGGCTTCATCAGGCTTTATCAGCTGACGCTATCGGGCTTTGTCGGCAATTCCT
GTCGCCACATCCCCACCTGTTCCGAATATGGCTATGAGGCGATTGCCCGCCATGGGCTCTGGGCCGGCGGCTGGATGGCG
CTGTTTCGTGTGGCGCGCTGCGGCCCTGGTGGCACCAGCGGGCTGGACCCGGTTCCGGAAGAACTCGATGGCAGCAAACG
CTGGTGGACGCCGTGGCGTTACTGGAGCCGGCATCGATGA

Upstream 100 bases:

>100_bases
CAAGGCACGCCACGCGTCCACCATGCTGACCTTCGAGGCGGTGGTCGATGCGCTCGACCAGATCGAAGGCCGGCCGGCTC
TCAACGTCGCGGGTTAGCCG

Downstream 100 bases:

>100_bases
ATGACTATGTGGCCCTGCTGCACAGCATCGTGCTCGGCCCCGGCAAGCGGCTCATCATGGCCGATCTCAGGGCCCTGGCG
GAAGAGCTGGGATTTGCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MCGEPGCRHEQTAVKAGRSRNWAGSFAKTPGRLFGVGFIRLYQLTLSGFVGNSCRHIPTCSEYGYEAIARHGLWAGGWMA
LFRVARCGPGGTSGLDPVPEELDGSKRWWTPWRYWSRHR

Sequences:

>Translated_119_residues
MCGEPGCRHEQTAVKAGRSRNWAGSFAKTPGRLFGVGFIRLYQLTLSGFVGNSCRHIPTCSEYGYEAIARHGLWAGGWMA
LFRVARCGPGGTSGLDPVPEELDGSKRWWTPWRYWSRHR
>Mature_119_residues
MCGEPGCRHEQTAVKAGRSRNWAGSFAKTPGRLFGVGFIRLYQLTLSGFVGNSCRHIPTCSEYGYEAIARHGLWAGGWMA
LFRVARCGPGGTSGLDPVPEELDGSKRWWTPWRYWSRHR

Specific function: Unknown

COG id: COG0759

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0161 family

Homologues:

Organism=Escherichia coli, GI87082322, Length=71, Percent_Identity=43.6619718309859, Blast_Score=67, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1747_AGRT5 (Q8UEL0)

Other databases:

- EMBL:   AE007869
- PIR:   AD2791
- PIR:   D97570
- RefSeq:   NP_354732.1
- STRING:   Q8UEL0
- GeneID:   1133785
- GenomeReviews:   AE007869_GR
- KEGG:   atu:Atu1747
- eggNOG:   COG0759
- HOGENOM:   HBG634291
- OMA:   SRCATTR
- ProtClustDB:   PRK00041
- BioCyc:   ATUM176299-1:ATU1747-MONOMER
- HAMAP:   MF_00386
- InterPro:   IPR002696
- ProDom:   PD004225
- TIGRFAMs:   TIGR00278

Pfam domain/function: PF01809 DUF37

EC number: NA

Molecular weight: Translated: 13331; Mature: 13331

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGEPGCRHEQTAVKAGRSRNWAGSFAKTPGRLFGVGFIRLYQLTLSGFVGNSCRHIPTC
CCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
SEYGYEAIARHGLWAGGWMALFRVARCGPGGTSGLDPVPEELDGSKRWWTPWRYWSRHR
HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCHHHHCCCC
>Mature Secondary Structure
MCGEPGCRHEQTAVKAGRSRNWAGSFAKTPGRLFGVGFIRLYQLTLSGFVGNSCRHIPTC
CCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
SEYGYEAIARHGLWAGGWMALFRVARCGPGGTSGLDPVPEELDGSKRWWTPWRYWSRHR
HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194