Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184693
Identifier: 159184693
GI number: 159184693
Start: 1274803
End: 1275072
Strand: Direct
Name: 159184693
Synonym: Atu1286
Alternate gene names: NA
Gene position: 1274803-1275072 (Clockwise)
Preceding gene: 159184692
Following gene: 17935187
Centisome position: 44.86
GC content: 58.89
Gene sequence:
>270_bases ATGCCGCTTCTTTCGGTCTTCGCCGTTTATTTCATCGTCTGGTGGACGGTGCTTTTCATCGTGCTTCCGATCGGCCTGCG CACCCAGGACGAGGAAGGCGATGTGGCACTGGGCACGGTCGCCAGCGCGCCAACCACATTCAAAGGCGGGCGGATCGTTC TGTGGACGACCCTGATCTCGGCGCTGATCTGTGGGCTTTGGTACGGCGCAACCTGGTGGTTCGGCTTCAGCCTTGATGAC CTGCCGAGAATTATCCCGGTTTTCGATTGA
Upstream 100 bases:
>100_bases GCCCTCTTTGTTTCTTTGTGGCTTTTTGCGCTTCTTGCCGAGAATTGATTCCGGTTCGCCGATGAATGCGTTACAAGGAC GCATTGTGCAGGAGGATCAC
Downstream 100 bases:
>100_bases AAAGGCGCTGACGATGTCGGCCGCGCCTGCATCCGTGCACTCAGCCTGACGGCAATCCGAAGTCTCTGCCCATGCATGTG GCAATTTCCGGCAAACCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MPLLSVFAVYFIVWWTVLFIVLPIGLRTQDEEGDVALGTVASAPTTFKGGRIVLWTTLISALICGLWYGATWWFGFSLDD LPRIIPVFD
Sequences:
>Translated_89_residues MPLLSVFAVYFIVWWTVLFIVLPIGLRTQDEEGDVALGTVASAPTTFKGGRIVLWTTLISALICGLWYGATWWFGFSLDD LPRIIPVFD >Mature_88_residues PLLSVFAVYFIVWWTVLFIVLPIGLRTQDEEGDVALGTVASAPTTFKGGRIVLWTTLISALICGLWYGATWWFGFSLDDL PRIIPVFD
Specific function: Unknown
COG id: COG5454
COG function: function code S; Predicted secreted protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9966; Mature: 9835
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLLSVFAVYFIVWWTVLFIVLPIGLRTQDEEGDVALGTVASAPTTFKGGRIVLWTTLIS CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEHHHHHHH ALICGLWYGATWWFGFSLDDLPRIIPVFD HHHHHHHHHHHHHCCCCHHCCCCCCCCCC >Mature Secondary Structure PLLSVFAVYFIVWWTVLFIVLPIGLRTQDEEGDVALGTVASAPTTFKGGRIVLWTTLIS CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEHHHHHHH ALICGLWYGATWWFGFSLDDLPRIIPVFD HHHHHHHHHHHHHCCCCHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA