Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 17935187
Identifier: 17935187
GI number: 17935187
Start: 1275148
End: 1275342
Strand: Direct
Name: 17935187
Synonym: Atu1287
Alternate gene names: NA
Gene position: 1275148-1275342 (Clockwise)
Preceding gene: 159184693
Following gene: 159184694
Centisome position: 44.87
GC content: 51.28
Gene sequence:
>195_bases ATGTGGCAATTTCCGGCAAACCTGGCTGAGGCCATGTCATATGGATGTCATATCTATCGTGCACACAGCAGCAACGTGGC CGCTTGCGTGATTCATCGCCGTATTCTTACTGGAATGATGGCCGGGAGCGGGGGGGGGCGTGCAAAAGCAAAAAAAAACA AGGCATTTCAGCCTTGTTTTTCAGGTTTCGCGTGA
Upstream 100 bases:
>100_bases GAGAATTATCCCGGTTTTCGATTGAAAAGGCGCTGACGATGTCGGCCGCGCCTGCATCCGTGCACTCAGCCTGACGGCAA TCCGAAGTCTCTGCCCATGC
Downstream 100 bases:
>100_bases TCTGTAACCGTTGCCGGGGCAGCGACGAGCGCGCCTAAGATCTGATCCTCCCAAGACTGACCGCGAAAATGACAAGAATT TAAACTTCCTGCCTCTTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 64; Mature: 64
Protein sequence:
>64_residues MWQFPANLAEAMSYGCHIYRAHSSNVAACVIHRRILTGMMAGSGGGRAKAKKNKAFQPCFSGFA
Sequences:
>Translated_64_residues MWQFPANLAEAMSYGCHIYRAHSSNVAACVIHRRILTGMMAGSGGGRAKAKKNKAFQPCFSGFA >Mature_64_residues MWQFPANLAEAMSYGCHIYRAHSSNVAACVIHRRILTGMMAGSGGGRAKAKKNKAFQPCFSGFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6906; Mature: 6906
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 10.9 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 10.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWQFPANLAEAMSYGCHIYRAHSSNVAACVIHRRILTGMMAGSGGGRAKAKKNKAFQPCF CCCCCHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC SGFA CCCC >Mature Secondary Structure MWQFPANLAEAMSYGCHIYRAHSSNVAACVIHRRILTGMMAGSGGGRAKAKKNKAFQPCF CCCCCHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC SGFA CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA