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The map label for this gene is 159184675

Identifier: 159184675

GI number: 159184675

Start: 1218804

End: 1219391

Strand: Direct

Name: 159184675

Synonym: Atu1227

Alternate gene names: NA

Gene position: 1218804-1219391 (Clockwise)

Preceding gene: 159184673

Following gene: 15888562

Centisome position: 42.89

GC content: 57.65

Gene sequence:

>588_bases
ATGCTGAAAAACATCTATGCATGGACGATGGCGCTCGCCGCGCGCAAAACCGCCGTGTGGTGGCTGGCGATCGTCGCTTT
CGTGGAAAGCTCGGTTTTCGTCGTGCCTGCGGATGTGCTTTTCCTGCCCATGGTGCTGGCCAAGCCGAAAAAGGCGATGT
TTTACGCGTTGGTGGCAACCGTCGCTTCGGTTCTCGGCGGCATTGCCGGCTGGTTTCTCGGCCATTATGCCTTTGAAAGC
ATCGCCCGGCCCATTCTTGAATTTTACGGCAAGCTCGACAGCTTCGAGCAACTGAAGAACTCGGTGAACTACGAAACCAT
CGTTCTGCTGCTGGTGACCTCGGGGCTCGCGCATCTTCCGCCCATCAAGGTCGTGACGATCCTCTCCGGTGCGGCCAATA
TCAGCCTTGGTCTGTTCATTCTTTCGGCCATCGTCGCACGCGGCGCGCGCTTTTTCATCCTCGCCGGATTGCTGCAGCGA
TACGGGGAATCGGTGCGCCACTTCATTGAAAAACGTCTCGGTGCCATAACGGCCGCGGCGGCTGCCGCACTCATCGCGAT
TTATGCGGTTTACGTTTTCGTGCGTTGA

Upstream 100 bases:

>100_bases
CAAGCCGGGCGCGTTGGCCTTCGGTTTGCGATCGACAAGCCGCGTGAAGCACCACCGATATGCCTGCCTCCCTTCGCAAC
ATTCTTTCCGGGGACACGAA

Downstream 100 bases:

>100_bases
TCAAACGCAATTTTTTCACTCTTACAATACTGTCGCATATCTTTCAGCTTACTGTCAGAATCTACATGTATCCGTTCTCT
CGTCCAATGAGGGAACCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MLKNIYAWTMALAARKTAVWWLAIVAFVESSVFVVPADVLFLPMVLAKPKKAMFYALVATVASVLGGIAGWFLGHYAFES
IARPILEFYGKLDSFEQLKNSVNYETIVLLLVTSGLAHLPPIKVVTILSGAANISLGLFILSAIVARGARFFILAGLLQR
YGESVRHFIEKRLGAITAAAAAALIAIYAVYVFVR

Sequences:

>Translated_195_residues
MLKNIYAWTMALAARKTAVWWLAIVAFVESSVFVVPADVLFLPMVLAKPKKAMFYALVATVASVLGGIAGWFLGHYAFES
IARPILEFYGKLDSFEQLKNSVNYETIVLLLVTSGLAHLPPIKVVTILSGAANISLGLFILSAIVARGARFFILAGLLQR
YGESVRHFIEKRLGAITAAAAAALIAIYAVYVFVR
>Mature_195_residues
MLKNIYAWTMALAARKTAVWWLAIVAFVESSVFVVPADVLFLPMVLAKPKKAMFYALVATVASVLGGIAGWFLGHYAFES
IARPILEFYGKLDSFEQLKNSVNYETIVLLLVTSGLAHLPPIKVVTILSGAANISLGLFILSAIVARGARFFILAGLLQR
YGESVRHFIEKRLGAITAAAAAALIAIYAVYVFVR

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 21210; Mature: 21210

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKNIYAWTMALAARKTAVWWLAIVAFVESSVFVVPADVLFLPMVLAKPKKAMFYALVAT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHH
VASVLGGIAGWFLGHYAFESIARPILEFYGKLDSFEQLKNSVNYETIVLLLVTSGLAHLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHCCCCCCC
PIKVVTILSGAANISLGLFILSAIVARGARFFILAGLLQRYGESVRHFIEKRLGAITAAA
CHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAALIAIYAVYVFVR
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MLKNIYAWTMALAARKTAVWWLAIVAFVESSVFVVPADVLFLPMVLAKPKKAMFYALVAT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHH
VASVLGGIAGWFLGHYAFESIARPILEFYGKLDSFEQLKNSVNYETIVLLLVTSGLAHLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHCCCCCCC
PIKVVTILSGAANISLGLFILSAIVARGARFFILAGLLQRYGESVRHFIEKRLGAITAAA
CHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAALIAIYAVYVFVR
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8478068 [H]