Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

Click here to switch to the map view.

The map label for this gene is 159184673

Identifier: 159184673

GI number: 159184673

Start: 1217373

End: 1217645

Strand: Direct

Name: 159184673

Synonym: Atu1225

Alternate gene names: NA

Gene position: 1217373-1217645 (Clockwise)

Preceding gene: 159184672

Following gene: 159184675

Centisome position: 42.84

GC content: 64.47

Gene sequence:

>273_bases
ATGAAATTCGGTATGGACCACAGGACGGGTCGCCTCAACGTCGGAAAATGGAGCCTTGCCATGCCGCGCTCGCGCGTCGG
CAGGATCGCCACCGGTTCCGCTCTGGTGGTTGGCGGAACACTTGGGTTTTTGCCGATTCTCGGTTTCTGGATGATTCCGC
TCGGTCTCGTCGTGCTCTCCCATGATCTGCCGGCGGTGCGCCGCAGGCGGCGGCGGCTGACGGTGTGGTGGGCATCGCGG
CAGAACCGCGAGACCCGCAACAGGGACCGCTGA

Upstream 100 bases:

>100_bases
AACGCATTCCTCTTGTTTTATATCGCCGGAGCCCCGATTTTCCGGGCTTATCGGCACTGAAAAAATTATCCACAGGCCAG
ATCAAAAAGGGCAGCAGGGA

Downstream 100 bases:

>100_bases
AGGGCTTAGCTGCCGATAGAGCTGCTGATGCCCTGTCCGGCCCAGAAGGCGGCATAGGCCAGCGCGGTAAAATAAATCGC
CGTCAGTCCAAGAAACAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MKFGMDHRTGRLNVGKWSLAMPRSRVGRIATGSALVVGGTLGFLPILGFWMIPLGLVVLSHDLPAVRRRRRRLTVWWASR
QNRETRNRDR

Sequences:

>Translated_90_residues
MKFGMDHRTGRLNVGKWSLAMPRSRVGRIATGSALVVGGTLGFLPILGFWMIPLGLVVLSHDLPAVRRRRRRLTVWWASR
QNRETRNRDR
>Mature_90_residues
MKFGMDHRTGRLNVGKWSLAMPRSRVGRIATGSALVVGGTLGFLPILGFWMIPLGLVVLSHDLPAVRRRRRRLTVWWASR
QNRETRNRDR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10336; Mature: 10336

Theoretical pI: Translated: 12.84; Mature: 12.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFGMDHRTGRLNVGKWSLAMPRSRVGRIATGSALVVGGTLGFLPILGFWMIPLGLVVLS
CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHC
HDLPAVRRRRRRLTVWWASRQNRETRNRDR
CCCHHHHHHHHEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MKFGMDHRTGRLNVGKWSLAMPRSRVGRIATGSALVVGGTLGFLPILGFWMIPLGLVVLS
CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHC
HDLPAVRRRRRRLTVWWASRQNRETRNRDR
CCCHHHHHHHHEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA