Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15888562
Identifier: 15888562
GI number: 15888562
Start: 1219497
End: 1220084
Strand: Direct
Name: 15888562
Synonym: Atu8150
Alternate gene names: NA
Gene position: 1219497-1220084 (Clockwise)
Preceding gene: 159184675
Following gene: 159184676
Centisome position: 42.92
GC content: 54.42
Gene sequence:
>588_bases ATGCGAAGATTCTGGAAGTGCTCGCTTTGGGGCATGGGTTTTATTGTGCTTGCGGCAGGCGGTTACCTCTATGCGATCCA GCTCCTCGGTAATTTTCACGAGGTTGTCGCGGGACAGTTTTATCGCTCCAACCAGCCCAGCAGTGAAGAGCTGGTTCGTT ATACCGAGGATCACGGAATAAAGACCGTGATCAATCTGCGCGGTTCCAACGAAGCGGAGAGCTGGTATCGCGACGAGGTG GAAACGTCGAAGAAGCTCGGCCTGAACCACATCGATTTCGGCATGTCGGCCAGCCGGGAGCTGGACATGAATCAGGTCAA TCAGCTGGTTGCCATCATGCGCGATGCGCCGAAACCCATTCTCATCCATTGCAAGTCGGGCGCGGACAGAACCGGCCTTG CGACGGCGCTCTATCTTAGCCGCATCGCACGTCTCGGTGAAGAGGAAGCGGAGAGCCAACTTTCCATTCGTTATGGACAT GTCAGCATTCCCTATCTTTCCGCAGCTTATGCCATGGACCGCACCTGGGAAAATGCGGAAAAAATGCCGATCACCGACGA CTTCGCTATCGCATCCAACGAATATTGA
Upstream 100 bases:
>100_bases CGCAATTTTTTCACTCTTACAATACTGTCGCATATCTTTCAGCTTACTGTCAGAATCTACATGTATCCGTTCTCTCGTCC AATGAGGGAACCGTTTTATT
Downstream 100 bases:
>100_bases GCACGGCTTCAGACCTGCGTCGTAGCGGATGCCGTCGCCCTTCTTTATCCCTATATCCAACTAGCGGCTATGTTGCCCTG AAATTGCCCCTTCGTCCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: Tyrosine/Serine Protein Phosphatase; Tyrosine/Serine Phosphatase
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MRRFWKCSLWGMGFIVLAAGGYLYAIQLLGNFHEVVAGQFYRSNQPSSEELVRYTEDHGIKTVINLRGSNEAESWYRDEV ETSKKLGLNHIDFGMSASRELDMNQVNQLVAIMRDAPKPILIHCKSGADRTGLATALYLSRIARLGEEEAESQLSIRYGH VSIPYLSAAYAMDRTWENAEKMPITDDFAIASNEY
Sequences:
>Translated_195_residues MRRFWKCSLWGMGFIVLAAGGYLYAIQLLGNFHEVVAGQFYRSNQPSSEELVRYTEDHGIKTVINLRGSNEAESWYRDEV ETSKKLGLNHIDFGMSASRELDMNQVNQLVAIMRDAPKPILIHCKSGADRTGLATALYLSRIARLGEEEAESQLSIRYGH VSIPYLSAAYAMDRTWENAEKMPITDDFAIASNEY >Mature_195_residues MRRFWKCSLWGMGFIVLAAGGYLYAIQLLGNFHEVVAGQFYRSNQPSSEELVRYTEDHGIKTVINLRGSNEAESWYRDEV ETSKKLGLNHIDFGMSASRELDMNQVNQLVAIMRDAPKPILIHCKSGADRTGLATALYLSRIARLGEEEAESQLSIRYGH VSIPYLSAAYAMDRTWENAEKMPITDDFAIASNEY
Specific function: Unknown
COG id: COG2365
COG function: function code T; Protein tyrosine/serine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22049; Mature: 22049
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: PS50056 TYR_PHOSPHATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRFWKCSLWGMGFIVLAAGGYLYAIQLLGNFHEVVAGQFYRSNQPSSEELVRYTEDHGI CCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCE KTVINLRGSNEAESWYRDEVETSKKLGLNHIDFGMSASRELDMNQVNQLVAIMRDAPKPI EEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCE LIHCKSGADRTGLATALYLSRIARLGEEEAESQLSIRYGHVSIPYLSAAYAMDRTWENAE EEEECCCCCCHHHHHHHHHHHHHHCCHHHHHCEEEEEECEEECCHHHHHHHHHHHHCCCC KMPITDDFAIASNEY CCCCCCCCCCCCCCC >Mature Secondary Structure MRRFWKCSLWGMGFIVLAAGGYLYAIQLLGNFHEVVAGQFYRSNQPSSEELVRYTEDHGI CCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCE KTVINLRGSNEAESWYRDEVETSKKLGLNHIDFGMSASRELDMNQVNQLVAIMRDAPKPI EEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCE LIHCKSGADRTGLATALYLSRIARLGEEEAESQLSIRYGHVSIPYLSAAYAMDRTWENAE EEEECCCCCCHHHHHHHHHHHHHHCCHHHHHCEEEEEECEEECCHHHHHHHHHHHHCCCC KMPITDDFAIASNEY CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA