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The map label for this gene is 159184514

Identifier: 159184514

GI number: 159184514

Start: 876145

End: 876552

Strand: Direct

Name: 159184514

Synonym: Atu0881

Alternate gene names: NA

Gene position: 876145-876552 (Clockwise)

Preceding gene: 159184513

Following gene: 15888222

Centisome position: 30.83

GC content: 61.76

Gene sequence:

>408_bases
ATGCTGTTCGGCTGTCTTTGCGCCGGAGCTGTTTATGCTGCCGGCGAAGTCGAAAAACGTGAAGGCATGATGAAGCAGAT
CGGCGGCTCCATGGGTGCGCTTGCCGCCATCTCCAAGGGCGAAAAGCCCTTTGACGCTGCCGCCGTCAAGGCTGCCGTGA
CGACCATCAGCACCAATGCCAAGGCTTTCCCCGACCAGTTCCCCGTCGGCTCAGAGACAGGCAGCGCGGCTGCTCCCGCC
ATCTGGGAAAACTTCGACGACTTCAAGGCCAAGGCCGCGAAGCTCGGAACGGATGCCGACGCGGTTCTCGCCAATCTCCC
CACCGATCAGGCCGGCGTCGCCACCGCCATGAAGACGCTCGGCGCCGATTGCGGCACCTGCCACCAGACCTATCGTCTGA
AAAAATAA

Upstream 100 bases:

>100_bases
GCCATCCGGAAAGGGCATCCTCGCCCGGTTCGATAAAGCGCCGGTGTCCATGCCGGAATCAAGGAGAGTGTGCATGAAAC
TGAAAACCATCACGGCGGCC

Downstream 100 bases:

>100_bases
TCGAAGCCTCTGAAAACGCCGCCCATCGGCGGCGTTTTTCGGCACGAAAGGCATCTGACCGGGTCAGGTGAGAATGGGGA
GAGGGGTATGTCCTCCATCT

Product: cytochrome C-556

Products: NA

Alternate protein names: Cytochrome c556

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MLFGCLCAGAVYAAGEVEKREGMMKQIGGSMGALAAISKGEKPFDAAAVKAAVTTISTNAKAFPDQFPVGSETGSAAAPA
IWENFDDFKAKAAKLGTDADAVLANLPTDQAGVATAMKTLGADCGTCHQTYRLKK

Sequences:

>Translated_135_residues
MLFGCLCAGAVYAAGEVEKREGMMKQIGGSMGALAAISKGEKPFDAAAVKAAVTTISTNAKAFPDQFPVGSETGSAAAPA
IWENFDDFKAKAAKLGTDADAVLANLPTDQAGVATAMKTLGADCGTCHQTYRLKK
>Mature_135_residues
MLFGCLCAGAVYAAGEVEKREGMMKQIGGSMGALAAISKGEKPFDAAAVKAAVTTISTNAKAFPDQFPVGSETGSAAAPA
IWENFDDFKAKAAKLGTDADAVLANLPTDQAGVATAMKTLGADCGTCHQTYRLKK

Specific function: Low-spin monoheme cytochrome c

COG id: COG3909

COG function: function code C; Cytochrome c556

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): C556_AGRT5 (Q8UH04)

Other databases:

- EMBL:   AE007869
- PIR:   AI2684
- PIR:   F97466
- RefSeq:   NP_353902.2
- ProteinModelPortal:   Q8UH04
- SMR:   Q8UH04
- STRING:   Q8UH04
- GeneID:   1132919
- GenomeReviews:   AE007869_GR
- KEGG:   atu:Atu0881
- eggNOG:   COG3909
- HOGENOM:   HBG657074
- OMA:   CHETFRL
- ProtClustDB:   CLSK800236
- BioCyc:   ATUM176299-1:ATU0881-MONOMER
- GO:   GO:0006810
- InterPro:   IPR010980
- InterPro:   IPR002321
- InterPro:   IPR012127
- InterPro:   IPR015984
- Gene3D:   G3DSA:1.20.120.10
- PIRSF:   PIRSF000027
- PRINTS:   PR00608

Pfam domain/function: PF01322 Cytochrom_C_2; SSF47175 Cyt_c_b562

EC number: NA

Molecular weight: Translated: 13793; Mature: 13793

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: PS51009 CYTCII

Important sites: BINDING 135-135 BINDING 138-138

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFGCLCAGAVYAAGEVEKREGMMKQIGGSMGALAAISKGEKPFDAAAVKAAVTTISTNA
CCHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
KAFPDQFPVGSETGSAAAPAIWENFDDFKAKAAKLGTDADAVLANLPTDQAGVATAMKTL
CCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHH
GADCGTCHQTYRLKK
CCCCCCHHHHHCCCC
>Mature Secondary Structure
MLFGCLCAGAVYAAGEVEKREGMMKQIGGSMGALAAISKGEKPFDAAAVKAAVTTISTNA
CCHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
KAFPDQFPVGSETGSAAAPAIWENFDDFKAKAAKLGTDADAVLANLPTDQAGVATAMKTL
CCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHH
GADCGTCHQTYRLKK
CCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194