Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184466
Identifier: 159184466
GI number: 159184466
Start: 788770
End: 789234
Strand: Direct
Name: 159184466
Synonym: Atu0792
Alternate gene names: NA
Gene position: 788770-789234 (Clockwise)
Preceding gene: 15888133
Following gene: 159184467
Centisome position: 27.76
GC content: 60.43
Gene sequence:
>465_bases ATGCTGACCTATATCGGCAAGGGCTACACATCGGGCTTCGTGGAAAATTACGACCGCGTTGCCTTCCGGCTGAATGCGGG CGAAGATATCGAGCTGGTGGAGGGGGCGGACGACGTCTGCGAAGGTCTGCTCTGCGAAAGCCACGCCCACTGTTTCAACG ACGGTATTGTGCAACGGGACGAGACGGCCCGTCTGTCGGTTTCGACGCTTCTTGGCGAAACATTGATTGCCGGTAAAAGG CTGCGGGTGACGCCGGATTTTCTCGCCAAGATGCGCTTGGCTTTCGCCGCCGGAGACATCCGGCAGGCCTGTCGCGGCTG CCAGTGGATCAAGCTGTGCGACCGTATCGCGGCTTCGGGATTTGCCGGCGTGAAAATCGGCGTGCCGTCACAGGTGGTGC CGAAGGATGCAACGCGCCATCCGATGCTCAGGCCCAAATATGGGCCGTCCGGCCGGAAATTGTGA
Upstream 100 bases:
>100_bases GGCGATCCGCACCTCGTCCGGCTCGGTGCGTGACGCCTTCGCCATCGTTGGATAGGGCGGAGCCGTGACCGTCCGCCTGC GGCCCCACCACCTTCTCTGT
Downstream 100 bases:
>100_bases TGTTCTAAATTCCGCCGGCCCTCATCCCTGTGCTTGTCACAGGGATCCAGCCGGCGCGCGTCCACGCGACGGGGAGACTC CTTTCAGCCCAAGGACTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MLTYIGKGYTSGFVENYDRVAFRLNAGEDIELVEGADDVCEGLLCESHAHCFNDGIVQRDETARLSVSTLLGETLIAGKR LRVTPDFLAKMRLAFAAGDIRQACRGCQWIKLCDRIAASGFAGVKIGVPSQVVPKDATRHPMLRPKYGPSGRKL
Sequences:
>Translated_154_residues MLTYIGKGYTSGFVENYDRVAFRLNAGEDIELVEGADDVCEGLLCESHAHCFNDGIVQRDETARLSVSTLLGETLIAGKR LRVTPDFLAKMRLAFAAGDIRQACRGCQWIKLCDRIAASGFAGVKIGVPSQVVPKDATRHPMLRPKYGPSGRKL >Mature_154_residues MLTYIGKGYTSGFVENYDRVAFRLNAGEDIELVEGADDVCEGLLCESHAHCFNDGIVQRDETARLSVSTLLGETLIAGKR LRVTPDFLAKMRLAFAAGDIRQACRGCQWIKLCDRIAASGFAGVKIGVPSQVVPKDATRHPMLRPKYGPSGRKL
Specific function: Unknown
COG id: COG3543
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16831; Mature: 16831
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTYIGKGYTSGFVENYDRVAFRLNAGEDIELVEGADDVCEGLLCESHAHCFNDGIVQRD CCCCCCCCCCCHHHHCCCEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCC ETARLSVSTLLGETLIAGKRLRVTPDFLAKMRLAFAAGDIRQACRGCQWIKLCDRIAASG CCHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC FAGVKIGVPSQVVPKDATRHPMLRPKYGPSGRKL CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLTYIGKGYTSGFVENYDRVAFRLNAGEDIELVEGADDVCEGLLCESHAHCFNDGIVQRD CCCCCCCCCCCHHHHCCCEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCC ETARLSVSTLLGETLIAGKRLRVTPDFLAKMRLAFAAGDIRQACRGCQWIKLCDRIAASG CCHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC FAGVKIGVPSQVVPKDATRHPMLRPKYGPSGRKL CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA