Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is ccrM [H]
Identifier: 159184467
GI number: 159184467
Start: 790755
End: 791900
Strand: Direct
Name: ccrM [H]
Synonym: Atu0794
Alternate gene names: 159184467
Gene position: 790755-791900 (Clockwise)
Preceding gene: 159184466
Following gene: 15888142
Centisome position: 27.83
GC content: 60.91
Gene sequence:
>1146_bases ATGGCAGCAGTTTTTCCGCTGGCCGATTTTCGGCGTGCCGGTTTTGATCGTGCGGGCGAGAGTGACGCCTGGAAAGACAG CATCATCAAAGGTGATTGTGTCGCTGCCTTGGATGCCCTCCCGAGCCAGTCGGTGGATGCGATTTTCGCCGATCCGCCCT ATAATCTCCAGCTTGGCGGCACGCTGCACCGGCCCGATCAGTCGCTGGTCGATGCCGTTGATGACGAATGGGACCAGTTC GCCTCCTTCGACGCCTATGACGCCTTCACCCGCGCCTGGCTGCTCGCCTGCCGCCGTGTGCTGAAACCGAACGGCACCAT CTGGGTCATCGGCTCCTATCACAATATCTTCCGCGTCGGCGCCATGCTCCAGAACCTCGATTTCTGGATCCTCAACGATA TCGTCTGGCGCAAGACCAACCCCATGCCCAATTTCAAGGGCCGCCGTTTCCAGAACGCCCATGAGACGATGATCTGGGCA AGTCGCGATCCGAAAGCCAAGAGCTATACCTTCAACTACGACGCGCTGAAGGCCTCCAACGACGATGTCCAGATGCGCTC GGACTGGCTGTTCCCGATTTGCAGCGGCCATGAGCGGCTGAAAGGCGACGACGGCAAGAAGGTGCATCCCACACAGAAGC CGGAAGCCCTGCTGGCGCGCATCATCATGGCATCGACCAAGCCGGGCGATATCGTGCTTGACCCGTTCTTCGGTTCCGGC ACCACGGGTGCCGTTGCAAAACGCCTTGGCCGCCATTTCGTCGGCATCGAGCGCGAACAGGATTATATCGATGCGGCATC CGCCCGCATCACCGCCGTCGAGCCGCTCGGCAAGGCGGAACTGACCGTCATGACCGGCAAGAAGGCCGAGCCGCGCGTGG CCTTTAACACGCTGGTGGAAAGCGGCCTCGTCCGCCCCGGCCAGGTGCTGACGGATGCACGACGTCGCTATAGCGCCATT ATTCGTGCCGATGGTACGCTCGCATCCGGCGGGACCGCCGGCTCCATTCACCGCCTCGGCGCGAAGGTGCAGGGTCTCGA TGCATGCAATGGATGGACGTTCTGGCATTTCGAGGACGGCGACGCGCTGAAGCCGATCGATGATCTCAGAACCATCATCC GCAGTGAAATGGCAAAGGCTGAATAG
Upstream 100 bases:
>100_bases AGCCATTTATTTCGCATTTTCCGTGACTTGTTCAGGCTTTGATAACCATCTTCGGTAACCATAAGCGTCAGTAGAGAGTA AGCGTATGGAGCGAGTACCA
Downstream 100 bases:
>100_bases TCGAGAGCCGTAGAGGCTGGAGACGGACGATCCACCGCCCGCCCTTGTCAGAATACGTCTCTGTCCGGTTTAGTACCTTC AGTCCCGGATAGAGAAACGA
Product: cell cycle regulated site-specific DNA-methyltransferase protein
Products: NA
Alternate protein names: M.SmeI; Adenine-specific methyltransferase SmeIP; M.CcrMI ortholog; Modification methylase SmeIP; M.SmeIP [H]
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MAAVFPLADFRRAGFDRAGESDAWKDSIIKGDCVAALDALPSQSVDAIFADPPYNLQLGGTLHRPDQSLVDAVDDEWDQF ASFDAYDAFTRAWLLACRRVLKPNGTIWVIGSYHNIFRVGAMLQNLDFWILNDIVWRKTNPMPNFKGRRFQNAHETMIWA SRDPKAKSYTFNYDALKASNDDVQMRSDWLFPICSGHERLKGDDGKKVHPTQKPEALLARIIMASTKPGDIVLDPFFGSG TTGAVAKRLGRHFVGIEREQDYIDAASARITAVEPLGKAELTVMTGKKAEPRVAFNTLVESGLVRPGQVLTDARRRYSAI IRADGTLASGGTAGSIHRLGAKVQGLDACNGWTFWHFEDGDALKPIDDLRTIIRSEMAKAE
Sequences:
>Translated_381_residues MAAVFPLADFRRAGFDRAGESDAWKDSIIKGDCVAALDALPSQSVDAIFADPPYNLQLGGTLHRPDQSLVDAVDDEWDQF ASFDAYDAFTRAWLLACRRVLKPNGTIWVIGSYHNIFRVGAMLQNLDFWILNDIVWRKTNPMPNFKGRRFQNAHETMIWA SRDPKAKSYTFNYDALKASNDDVQMRSDWLFPICSGHERLKGDDGKKVHPTQKPEALLARIIMASTKPGDIVLDPFFGSG TTGAVAKRLGRHFVGIEREQDYIDAASARITAVEPLGKAELTVMTGKKAEPRVAFNTLVESGLVRPGQVLTDARRRYSAI IRADGTLASGGTAGSIHRLGAKVQGLDACNGWTFWHFEDGDALKPIDDLRTIIRSEMAKAE >Mature_380_residues AAVFPLADFRRAGFDRAGESDAWKDSIIKGDCVAALDALPSQSVDAIFADPPYNLQLGGTLHRPDQSLVDAVDDEWDQFA SFDAYDAFTRAWLLACRRVLKPNGTIWVIGSYHNIFRVGAMLQNLDFWILNDIVWRKTNPMPNFKGRRFQNAHETMIWAS RDPKAKSYTFNYDALKASNDDVQMRSDWLFPICSGHERLKGDDGKKVHPTQKPEALLARIIMASTKPGDIVLDPFFGSGT TGAVAKRLGRHFVGIEREQDYIDAASARITAVEPLGKAELTVMTGKKAEPRVAFNTLVESGLVRPGQVLTDARRRYSAII RADGTLASGGTAGSIHRLGAKVQGLDACNGWTFWHFEDGDALKPIDDLRTIIRSEMAKAE
Specific function: This methylase recognizes the double-stranded sequence GANTC and causes specific methylation on A-2 on both strands. Ccrm-mediated methylation has important cellular functions. Appears to contribute to the accurate cell-cycle control of DNA replication an
COG id: COG0863
COG function: function code L; DNA modification methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI87082238, Length=278, Percent_Identity=34.1726618705036, Blast_Score=138, Evalue=6e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002941 - InterPro: IPR002052 - InterPro: IPR001091 [H]
Pfam domain/function: PF01555 N6_N4_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 42216; Mature: 42085
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAVFPLADFRRAGFDRAGESDAWKDSIIKGDCVAALDALPSQSVDAIFADPPYNLQLGG CCCCCCCHHHHHCCCCCCCCCCHHHHHCCCCHHHHHHHHCCCCCCCEEECCCCCCEEECC TLHRPDQSLVDAVDDEWDQFASFDAYDAFTRAWLLACRRVLKPNGTIWVIGSYHNIFRVG EECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHH AMLQNLDFWILNDIVWRKTNPMPNFKGRRFQNAHETMIWASRDPKAKSYTFNYDALKASN HHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEECCHHEECCC DDVQMRSDWLFPICSGHERLKGDDGKKVHPTQKPEALLARIIMASTKPGDIVLDPFFGSG CCCEECCCCCCEECCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCC TTGAVAKRLGRHFVGIEREQDYIDAASARITAVEPLGKAELTVMTGKKAEPRVAFNTLVE CHHHHHHHHHHHHCCCCCCHHHHHHHCCEEEEECCCCCCEEEEEECCCCCCHHHHHHHHH SGLVRPGQVLTDARRRYSAIIRADGTLASGGTAGSIHRLGAKVQGLDACNGWTFWHFEDG HCCCCCHHHHHHHHHHHHHHEEECCCEECCCCCCHHHHHCCCCCCCCCCCCEEEEEECCC DALKPIDDLRTIIRSEMAKAE CCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure AAVFPLADFRRAGFDRAGESDAWKDSIIKGDCVAALDALPSQSVDAIFADPPYNLQLGG CCCCCCHHHHHCCCCCCCCCCHHHHHCCCCHHHHHHHHCCCCCCCEEECCCCCCEEECC TLHRPDQSLVDAVDDEWDQFASFDAYDAFTRAWLLACRRVLKPNGTIWVIGSYHNIFRVG EECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHH AMLQNLDFWILNDIVWRKTNPMPNFKGRRFQNAHETMIWASRDPKAKSYTFNYDALKASN HHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEECCHHEECCC DDVQMRSDWLFPICSGHERLKGDDGKKVHPTQKPEALLARIIMASTKPGDIVLDPFFGSG CCCEECCCCCCEECCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCC TTGAVAKRLGRHFVGIEREQDYIDAASARITAVEPLGKAELTVMTGKKAEPRVAFNTLVE CHHHHHHHHHHHHCCCCCCHHHHHHHCCEEEEECCCCCCEEEEEECCCCCCHHHHHHHHH SGLVRPGQVLTDARRRYSAIIRADGTLASGGTAGSIHRLGAKVQGLDACNGWTFWHFEDG HCCCCCHHHHHHHHHHHHHHEEECCCEECCCCCCHHHHHCCCCCCCCCCCCEEEEEECCC DALKPIDDLRTIIRSEMAKAE CCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9294447; 11481430 [H]