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The map label for this gene is ahyR [H]

Identifier: 159184428

GI number: 159184428

Start: 707221

End: 707826

Strand: Direct

Name: ahyR [H]

Synonym: Atu0707

Alternate gene names: 159184428

Gene position: 707221-707826 (Clockwise)

Preceding gene: 159184427

Following gene: 159184429

Centisome position: 24.89

GC content: 54.95

Gene sequence:

>606_bases
ATGGTGCTCGACCTGTCGTCGGAACTGGCGAGCGAATTGTCGCAATATACTGTTATCACCAGCTGGCCGGCCGAGCTTTT
GCAGCGTTATGATGAAGAGGGCATGCTGCAGAACAGCCGGGTGATGGCGCAGCTGAAAAAATCGACCATACCCTTCTCCG
TCTCCATGGATTTTCTGGTCAACGGCGAGGAGCATATCGCTAATAAAACGGTGATAGGTCTGTTCGAGCGCTTCGAGATG
GTGAATTCGGTCTGGTTTCCCGTTCACGACGTCACCATGAGGCGCGGCGCCATATCCTTTTCAGGCAATAAGGCGGTTCT
GCCAACCACCCGGCTTGCCGAACTTTTGTATATTTCCTGCCATGTCTTTGCCCGGCTATCTGAAATCCGCCGCCTGGACC
TCAGGGTTCCCGAAACACTGAGCGAGCGGGAGATCGACTGTCTGAACTGGACCGCCGCTGGCAAGACGAGCGCTGAAATC
GCTGAGATCATGATGCTCTCGGAACATACCATCAATCACTACCTGAACCGCGCGACCAAAAAACTCGACACGGTCAACCG
CACCCAGGCTGTCGCGAAAGCGCTGCGGGTCGGCCTGATAAAATAG

Upstream 100 bases:

>100_bases
TGGTGTGGATTGCGTTCGCGAGATCGCCGGTCTCAACACGCAATTCGATATATTCCGCTTCCTGAAACGGCTGACGGAGG
TCTGGGAGTTTCGCGCCTTC

Downstream 100 bases:

>100_bases
CGAAATCATAATTTTATCATTGTGATAAACCGCTACCTGGGCGATCCTCCTTTCGAATCACCGGAAAGGAGAAATCGTTT
GCCGGAACGGCATAAGGTTA

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MVLDLSSELASELSQYTVITSWPAELLQRYDEEGMLQNSRVMAQLKKSTIPFSVSMDFLVNGEEHIANKTVIGLFERFEM
VNSVWFPVHDVTMRRGAISFSGNKAVLPTTRLAELLYISCHVFARLSEIRRLDLRVPETLSEREIDCLNWTAAGKTSAEI
AEIMMLSEHTINHYLNRATKKLDTVNRTQAVAKALRVGLIK

Sequences:

>Translated_201_residues
MVLDLSSELASELSQYTVITSWPAELLQRYDEEGMLQNSRVMAQLKKSTIPFSVSMDFLVNGEEHIANKTVIGLFERFEM
VNSVWFPVHDVTMRRGAISFSGNKAVLPTTRLAELLYISCHVFARLSEIRRLDLRVPETLSEREIDCLNWTAAGKTSAEI
AEIMMLSEHTINHYLNRATKKLDTVNRTQAVAKALRVGLIK
>Mature_201_residues
MVLDLSSELASELSQYTVITSWPAELLQRYDEEGMLQNSRVMAQLKKSTIPFSVSMDFLVNGEEHIANKTVIGLFERFEM
VNSVWFPVHDVTMRRGAISFSGNKAVLPTTRLAELLYISCHVFARLSEIRRLDLRVPETLSEREIDCLNWTAAGKTSAEI
AEIMMLSEHTINHYLNRATKKLDTVNRTQAVAKALRVGLIK

Specific function: Functions as a BHL-responsive transcriptional regulator [H]

COG id: COG2771

COG function: function code K; DNA-binding HTH domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016032
- InterPro:   IPR005143
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03472 Autoind_bind; PF00196 GerE [H]

EC number: NA

Molecular weight: Translated: 22788; Mature: 22788

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLDLSSELASELSQYTVITSWPAELLQRYDEEGMLQNSRVMAQLKKSTIPFSVSMDFLV
CEEECHHHHHHHHHHHEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEHEEE
NGEEHIANKTVIGLFERFEMVNSVWFPVHDVTMRRGAISFSGNKAVLPTTRLAELLYISC
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEECCCEEECCHHHHHHHHHHHH
HVFARLSEIRRLDLRVPETLSEREIDCLNWTAAGKTSAEIAEIMMLSEHTINHYLNRATK
HHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KLDTVNRTQAVAKALRVGLIK
HHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVLDLSSELASELSQYTVITSWPAELLQRYDEEGMLQNSRVMAQLKKSTIPFSVSMDFLV
CEEECHHHHHHHHHHHEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEHEEE
NGEEHIANKTVIGLFERFEMVNSVWFPVHDVTMRRGAISFSGNKAVLPTTRLAELLYISC
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEECCCEEECCHHHHHHHHHHHH
HVFARLSEIRRLDLRVPETLSEREIDCLNWTAAGKTSAEIAEIMMLSEHTINHYLNRATK
HHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KLDTVNRTQAVAKALRVGLIK
HHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9286976 [H]