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The map label for this gene is nrt [H]

Identifier: 159184429

GI number: 159184429

Start: 707905

End: 709128

Strand: Direct

Name: nrt [H]

Synonym: Atu0708

Alternate gene names: 159184429

Gene position: 707905-709128 (Clockwise)

Preceding gene: 159184428

Following gene: 159184430

Centisome position: 24.91

GC content: 60.87

Gene sequence:

>1224_bases
TTGCCGGAACGGCATAAGGTTAAAGCGGGATTTTCTCCGACTATCGATTGCGCCGTGTTGATAGCCGCTGCCGAAAAAGG
TTTTGCTGCCGATGAAGGCATAGAACTGGAACTTTTCAGAGAGCAGTCTGCGCGCGCCGTTCTCGCCGCACTTGGCGGGG
ATGACATTCACATAGGGCATCTGCCCGCACCGGTTCCGGTCGGCTCCGCTGTCGGCCTCGATGATCTGCCGGCCGATATT
GTCGGCGTTTTCACGCTTTCCCTCGGCGGATCGGCAACGGCGGTTTCCCATGGATTTTACGATGAGCTTTACCGCGAAGG
GATGAAGCTGCCCGATCCGGCTGCCTTCGGGCGGGCCATGGCCCGCGTCTGCGCCGCGCGGCGGGCGGCGGGCAAAAATC
CGCCGGTCTTTGCTGTGGAGGATATTGTCTCCACGCCCTTTTATACCTTGCGTTATCTGCTCGGAAGCTGCGGCGTCCTG
CTCGGCCGGGACATGGAAATCATCGAGGCCCTGCCGAAAGCAATGCCCGCACTTCTGGAAAGCGGCAAAGTCGATGCACT
CTGTACCGCCGAACCGGCCGGCAGCGCCGTGGTGCTCGGCGGCGCCGGGCGGATCGTCACCACGGGCGCCCTGATCTGGC
ATAATGCGCCGGAAAAGATACTGGCCGTGAAAAAAGGCTGGGCGGAGGAAAATGCCACTTTGCTGGAAGGATTGCTGCGG
GCGCTCTACCGTGCCGGCGAATGGTGTGCGAACGACGCCAATATCGAGGAGCTGGCCGGCATTCTCGCCGCCCCTCAATA
CATCGATGAAAACGGTGAATTCCTGCTGCCGGCGCTGACCGGCTATATTTCCACTTCGCAACGGGACATGCAGCGTTTTC
AGGAATTCTTCGTGACGAGCGCCAAGGCGGCCAATTTTCCATGGCAGAGCCAGGCGCTATGGTTCTTCAGCCAGATGCTG
CGCTGGGGCGAAGTTCCCGCTGAGCGACGGCTGGAACCAACGATGGCGGAGGCGGCGCGCAATGCCTATCGGCCGGATAT
TTTCCGCAAGGCCATGAAGCCGCTTTTCGTACCCGTGCCGGGCGCCAATCTGAAGCTTGAAGGCACGCTGAAGGAACCTG
TCCATGTCGGCGCCTCGCGCACCGGCCTCGTCCTTGGCCCCGACTGTTTTTTCGACGGCCGTGTCTTCGACCCGGAAACG
CTCGAGATGGACGACGAAATCTGA

Upstream 100 bases:

>100_bases
GCGGGTCGGCCTGATAAAATAGCGAAATCATAATTTTATCATTGTGATAAACCGCTACCTGGGCGATCCTCCTTTCGAAT
CACCGGAAAGGAGAAATCGT

Downstream 100 bases:

>100_bases
AACCGCAGCGTTAAATCGTCGCGAATACCTGCCGCCTGCGCTTTGGCATTGGCGAAGCGCTCCGGCTTGGCTATGGATGC
ACGCAATACCCTGGAATGAT

Product: ABC transporter, nucleotide binding/ATPase protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MPERHKVKAGFSPTIDCAVLIAAAEKGFAADEGIELELFREQSARAVLAALGGDDIHIGHLPAPVPVGSAVGLDDLPADI
VGVFTLSLGGSATAVSHGFYDELYREGMKLPDPAAFGRAMARVCAARRAAGKNPPVFAVEDIVSTPFYTLRYLLGSCGVL
LGRDMEIIEALPKAMPALLESGKVDALCTAEPAGSAVVLGGAGRIVTTGALIWHNAPEKILAVKKGWAEENATLLEGLLR
ALYRAGEWCANDANIEELAGILAAPQYIDENGEFLLPALTGYISTSQRDMQRFQEFFVTSAKAANFPWQSQALWFFSQML
RWGEVPAERRLEPTMAEAARNAYRPDIFRKAMKPLFVPVPGANLKLEGTLKEPVHVGASRTGLVLGPDCFFDGRVFDPET
LEMDDEI

Sequences:

>Translated_407_residues
MPERHKVKAGFSPTIDCAVLIAAAEKGFAADEGIELELFREQSARAVLAALGGDDIHIGHLPAPVPVGSAVGLDDLPADI
VGVFTLSLGGSATAVSHGFYDELYREGMKLPDPAAFGRAMARVCAARRAAGKNPPVFAVEDIVSTPFYTLRYLLGSCGVL
LGRDMEIIEALPKAMPALLESGKVDALCTAEPAGSAVVLGGAGRIVTTGALIWHNAPEKILAVKKGWAEENATLLEGLLR
ALYRAGEWCANDANIEELAGILAAPQYIDENGEFLLPALTGYISTSQRDMQRFQEFFVTSAKAANFPWQSQALWFFSQML
RWGEVPAERRLEPTMAEAARNAYRPDIFRKAMKPLFVPVPGANLKLEGTLKEPVHVGASRTGLVLGPDCFFDGRVFDPET
LEMDDEI
>Mature_406_residues
PERHKVKAGFSPTIDCAVLIAAAEKGFAADEGIELELFREQSARAVLAALGGDDIHIGHLPAPVPVGSAVGLDDLPADIV
GVFTLSLGGSATAVSHGFYDELYREGMKLPDPAAFGRAMARVCAARRAAGKNPPVFAVEDIVSTPFYTLRYLLGSCGVLL
GRDMEIIEALPKAMPALLESGKVDALCTAEPAGSAVVLGGAGRIVTTGALIWHNAPEKILAVKKGWAEENATLLEGLLRA
LYRAGEWCANDANIEELAGILAAPQYIDENGEFLLPALTGYISTSQRDMQRFQEFFVTSAKAANFPWQSQALWFFSQMLR
WGEVPAERRLEPTMAEAARNAYRPDIFRKAMKPLFVPVPGANLKLEGTLKEPVHVGASRTGLVLGPDCFFDGRVFDPETL
EMDDEI

Specific function: Probably part of a high-affinity binding-protein- dependent transport system for nitrate. Probably responsible for energy coupling to the transport system [H]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR015168
- InterPro:   IPR005890 [H]

Pfam domain/function: PF00005 ABC_tran; PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 43813; Mature: 43682

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: PS00070 ALDEHYDE_DEHYDR_CYS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPERHKVKAGFSPTIDCAVLIAAAEKGFAADEGIELELFREQSARAVLAALGGDDIHIGH
CCCCCCCCCCCCCCHHHHHHEEHHCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCEEECC
LPAPVPVGSAVGLDDLPADIVGVFTLSLGGSATAVSHGFYDELYREGMKLPDPAAFGRAM
CCCCCCCCCCCCCCCCCHHHHHHHHEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
ARVCAARRAAGKNPPVFAVEDIVSTPFYTLRYLLGSCGVLLGRDMEIIEALPKAMPALLE
HHHHHHHHHCCCCCCEEEHHHHHHCHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHH
SGKVDALCTAEPAGSAVVLGGAGRIVTTGALIWHNAPEKILAVKKGWAEENATLLEGLLR
CCCCCEEEECCCCCCEEEECCCCCEEEECEEEECCCCHHHHHHHCCCCCCCHHHHHHHHH
ALYRAGEWCANDANIEELAGILAAPQYIDENGEFLLPALTGYISTSQRDMQRFQEFFVTS
HHHHCCCCCCCCCCHHHHHHHHHCCHHCCCCCCEEHHHHHHHHCCCHHHHHHHHHHHHHH
AKAANFPWQSQALWFFSQMLRWGEVPAERRLEPTMAEAARNAYRPDIFRKAMKPLFVPVP
HHCCCCCCCHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHCCCHHHHHHHHCCEEEECC
GANLKLEGTLKEPVHVGASRTGLVLGPDCFFDGRVFDPETLEMDDEI
CCCEEEECCCCCCHHCCCCCCCEEECCCCCCCCEECCCCCCCCCCCC
>Mature Secondary Structure 
PERHKVKAGFSPTIDCAVLIAAAEKGFAADEGIELELFREQSARAVLAALGGDDIHIGH
CCCCCCCCCCCCCHHHHHHEEHHCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCEEECC
LPAPVPVGSAVGLDDLPADIVGVFTLSLGGSATAVSHGFYDELYREGMKLPDPAAFGRAM
CCCCCCCCCCCCCCCCCHHHHHHHHEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
ARVCAARRAAGKNPPVFAVEDIVSTPFYTLRYLLGSCGVLLGRDMEIIEALPKAMPALLE
HHHHHHHHHCCCCCCEEEHHHHHHCHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHH
SGKVDALCTAEPAGSAVVLGGAGRIVTTGALIWHNAPEKILAVKKGWAEENATLLEGLLR
CCCCCEEEECCCCCCEEEECCCCCEEEECEEEECCCCHHHHHHHCCCCCCCHHHHHHHHH
ALYRAGEWCANDANIEELAGILAAPQYIDENGEFLLPALTGYISTSQRDMQRFQEFFVTS
HHHHCCCCCCCCCCHHHHHHHHHCCHHCCCCCCEEHHHHHHHHCCCHHHHHHHHHHHHHH
AKAANFPWQSQALWFFSQMLRWGEVPAERRLEPTMAEAARNAYRPDIFRKAMKPLFVPVP
HHCCCCCCCHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHCCCHHHHHHHHCCEEEECC
GANLKLEGTLKEPVHVGASRTGLVLGPDCFFDGRVFDPETLEMDDEI
CCCEEEECCCCCCHHCCCCCCCEEECCCCCCCCEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]