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The map label for this gene is fliR [H]

Identifier: 159184373

GI number: 159184373

Start: 566699

End: 567421

Strand: Direct

Name: fliR [H]

Synonym: Atu0582

Alternate gene names: 159184373

Gene position: 566699-567421 (Clockwise)

Preceding gene: 159184372

Following gene: 159184374

Centisome position: 19.94

GC content: 57.95

Gene sequence:

>723_bases
TTGTTCCTTGCCATCTGCCGCATAGGCGCCTGCTTCATGACCATGCCGGGCTTTTCAAGTTCGCGCATCTCGCCGCAGAT
TCGCATGCTTCTCTGTGTAGCGGTATCCATGGCGCTTCTGCCCGTCCTGTGGGACACCATCTACCCAAAGGTTTCCGGTG
CGAGCCAGGGCGCGGTCGTTGGCCTCATCTTCTCCGAGGTTCTCATCGGCGCAATGTATGGGCTGATCGCCCGTTTCTAT
ACGCTCGGTTTCCAGTTCACCGGTGCGCTCATCGGCGCTTCCATCGGCCTCAGTGCGCCCGGCGGTGCCGATCCCATCGA
AGACGTGCAGGAAAACCAGATCGCCAATTTCATCACCTTCGGTGGCCTGCTGGTGCTGTTCATGATGGATTTCCACCACA
TCGTCCTGAAGGCGCTGGTCGATTCCTATAGCGCCACACCGGTCGGTGCGCTCATCAGCGGACAGAAGATGCTGATCACG
CTGACGGATACGCTCAGGGCGTCCTTTTCGATCATGCTGCGGCTGGCGAGCCCCTTTGTTATTTACGGCCTGATGTTCAA
CGTCGCGGTCGGTCTCATCAACAAGCTGGCGCCGCAAATCCCGGTCTTCTTCATATCGACACCCTTCGTTCTGGCGGGTG
GTCTTTTCATGCTTTATTTGTCGGTCGCGGCCCTCATCCGGCAATTCGTGGATGGGTTCGGCCCGGTCTTTATCGGCTTT
TGA

Upstream 100 bases:

>100_bases
CCCTGCCGGTTCTTTCACATGTGGAACTGGCCAAGGGTCTCGAGATCAAGATTCTGGGCGCCATTTCATGATAACCGACC
CGCAGGGAACAATCATTGCA

Downstream 100 bases:

>100_bases
TCGGGAGGAAACGCCATGGCTTCGGACAAGCGCTCGGAAAAGCTCAAGCGTCTGGTAACGGTCCAGCGGCATATGGAAAA
AATGGCCGAGGTGGAACTGG

Product: flagellar biosynthesis protein FliR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MFLAICRIGACFMTMPGFSSSRISPQIRMLLCVAVSMALLPVLWDTIYPKVSGASQGAVVGLIFSEVLIGAMYGLIARFY
TLGFQFTGALIGASIGLSAPGGADPIEDVQENQIANFITFGGLLVLFMMDFHHIVLKALVDSYSATPVGALISGQKMLIT
LTDTLRASFSIMLRLASPFVIYGLMFNVAVGLINKLAPQIPVFFISTPFVLAGGLFMLYLSVAALIRQFVDGFGPVFIGF

Sequences:

>Translated_240_residues
MFLAICRIGACFMTMPGFSSSRISPQIRMLLCVAVSMALLPVLWDTIYPKVSGASQGAVVGLIFSEVLIGAMYGLIARFY
TLGFQFTGALIGASIGLSAPGGADPIEDVQENQIANFITFGGLLVLFMMDFHHIVLKALVDSYSATPVGALISGQKMLIT
LTDTLRASFSIMLRLASPFVIYGLMFNVAVGLINKLAPQIPVFFISTPFVLAGGLFMLYLSVAALIRQFVDGFGPVFIGF
>Mature_240_residues
MFLAICRIGACFMTMPGFSSSRISPQIRMLLCVAVSMALLPVLWDTIYPKVSGASQGAVVGLIFSEVLIGAMYGLIARFY
TLGFQFTGALIGASIGLSAPGGADPIEDVQENQIANFITFGGLLVLFMMDFHHIVLKALVDSYSATPVGALISGQKMLIT
LTDTLRASFSIMLRLASPFVIYGLMFNVAVGLINKLAPQIPVFFISTPFVLAGGLFMLYLSVAALIRQFVDGFGPVFIGF

Specific function: Role in flagellar biosynthesis [H]

COG id: COG1684

COG function: function code NU; Flagellar biosynthesis pathway, component FliR

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliR/mopE/spaR family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006303
- InterPro:   IPR002010 [H]

Pfam domain/function: PF01311 Bac_export_1 [H]

EC number: NA

Molecular weight: Translated: 25701; Mature: 25701

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLAICRIGACFMTMPGFSSSRISPQIRMLLCVAVSMALLPVLWDTIYPKVSGASQGAVV
CEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
GLIFSEVLIGAMYGLIARFYTLGFQFTGALIGASIGLSAPGGADPIEDVQENQIANFITF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
GGLLVLFMMDFHHIVLKALVDSYSATPVGALISGQKMLITLTDTLRASFSIMLRLASPFV
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHH
IYGLMFNVAVGLINKLAPQIPVFFISTPFVLAGGLFMLYLSVAALIRQFVDGFGPVFIGF
HHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCC
>Mature Secondary Structure
MFLAICRIGACFMTMPGFSSSRISPQIRMLLCVAVSMALLPVLWDTIYPKVSGASQGAVV
CEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
GLIFSEVLIGAMYGLIARFYTLGFQFTGALIGASIGLSAPGGADPIEDVQENQIANFITF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
GGLLVLFMMDFHHIVLKALVDSYSATPVGALISGQKMLITLTDTLRASFSIMLRLASPFV
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHH
IYGLMFNVAVGLINKLAPQIPVFFISTPFVLAGGLFMLYLSVAALIRQFVDGFGPVFIGF
HHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7814323; 11259647 [H]