Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184374
Identifier: 159184374
GI number: 159184374
Start: 567437
End: 567856
Strand: Direct
Name: 159184374
Synonym: Atu0583
Alternate gene names: NA
Gene position: 567437-567856 (Clockwise)
Preceding gene: 159184373
Following gene: 159184375
Centisome position: 19.97
GC content: 54.76
Gene sequence:
>420_bases ATGGCTTCGGACAAGCGCTCGGAAAAGCTCAAGCGTCTGGTAACGGTCCAGCGGCATATGGAAAAAATGGCCGAGGTGGA ACTGGCCGATACCACTCGCGTGCGCAGCGAAGTGGCGCAATCCATGGAGAGCACGTTTGAGGCCATGAGTTCCATGGAAC CGGTGCATCAGACCTTCTCCAAGCATTATTCGGACCGCTACAGCCGCCTGGTCGTCCAGGACCGCCAGCTCGAAGGCGTT CAGCAGTTTCAGGAAAACAAGGTTCTGAAGGAAAAGACCAAGGCTGACAGGCTGGAGGACAGGATGCATATTGCCCGCGA TCTCGAGGATCGCGAGGCGGGTGATAATGCAATCTACGATTTGTTAGAAATTACGAATGTTTCCCACACACCAGCCTCCA GCAAGGTTGGCGATCCATAG
Upstream 100 bases:
>100_bases TGGTCTTTTCATGCTTTATTTGTCGGTCGCGGCCCTCATCCGGCAATTCGTGGATGGGTTCGGCCCGGTCTTTATCGGCT TTTGATCGGGAGGAAACGCC
Downstream 100 bases:
>100_bases TCTTCCCGTTGTTGCATCGCGGGCGTCTGAAATACACCGTTCGCGATGCTTCTTGATTGAGTGAACGCGTCGGCTTTCCT CCGGCACGTTCGTCAGCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MASDKRSEKLKRLVTVQRHMEKMAEVELADTTRVRSEVAQSMESTFEAMSSMEPVHQTFSKHYSDRYSRLVVQDRQLEGV QQFQENKVLKEKTKADRLEDRMHIARDLEDREAGDNAIYDLLEITNVSHTPASSKVGDP
Sequences:
>Translated_139_residues MASDKRSEKLKRLVTVQRHMEKMAEVELADTTRVRSEVAQSMESTFEAMSSMEPVHQTFSKHYSDRYSRLVVQDRQLEGV QQFQENKVLKEKTKADRLEDRMHIARDLEDREAGDNAIYDLLEITNVSHTPASSKVGDP >Mature_138_residues ASDKRSEKLKRLVTVQRHMEKMAEVELADTTRVRSEVAQSMESTFEAMSSMEPVHQTFSKHYSDRYSRLVVQDRQLEGVQ QFQENKVLKEKTKADRLEDRMHIARDLEDREAGDNAIYDLLEITNVSHTPASSKVGDP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16054; Mature: 15923
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASDKRSEKLKRLVTVQRHMEKMAEVELADTTRVRSEVAQSMESTFEAMSSMEPVHQTFS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KHYSDRYSRLVVQDRQLEGVQQFQENKVLKEKTKADRLEDRMHIARDLEDREAGDNAIYD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LLEITNVSHTPASSKVGDP HHHHHCCCCCCCCCCCCCC >Mature Secondary Structure ASDKRSEKLKRLVTVQRHMEKMAEVELADTTRVRSEVAQSMESTFEAMSSMEPVHQTFS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KHYSDRYSRLVVQDRQLEGVQQFQENKVLKEKTKADRLEDRMHIARDLEDREAGDNAIYD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LLEITNVSHTPASSKVGDP HHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA