Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184336
Identifier: 159184336
GI number: 159184336
Start: 476434
End: 477270
Strand: Direct
Name: 159184336
Synonym: Atu0489
Alternate gene names: NA
Gene position: 476434-477270 (Clockwise)
Preceding gene: 159184334
Following gene: 159184337
Centisome position: 16.77
GC content: 58.42
Gene sequence:
>837_bases ATGGAACAGGCGCTTGAACTGGCGCCACGGTGGACGGCGGGCTGGTTTCGCTTCGGGGAGTATCACGAAAAGGCGGGGGA GACCGCAAAGGCGGTGGCGGCTTACGAGAAAGTCGCCGAGCTGGATGCGGAAGGTCTGTTTGCAGCCGAACTGAAACTCG CGGTTCTCGGCGCCGCGGAAACACCCGAACAACCGCCGAGCCGCTACGTGGAAGGGTTGTTCGACGACTACGCCGACCGT TTTGAAACCTCGCTTGTCGAGAAGCTGGATTACAGCGTGCCGCAGAAACTGGCGGAGCTGATCGGCAAAGCGGCGACAGG CGACGCCTTTGACACCATTGTCGATATCGGTTGCGGCACCGGTCTCCTTGGCATCGAAATCCGCTCTCTGGCAAAACGGC TCGAGGGTTTTGATATCTCCCAGAACATGCTTGCCAAGGCCGATGAAAAGAGTCTTTACGACCATCTCGGACAAGCCGAT CTTTCGCTCGACGCGGAGGCTTCGGGGCTCTTTACGCCGGTACTCACGCAGCACCGCGCCGATCTCGTCGCCGCTGCCGA TGTGATGATGTATCTCGGGAGTCTTGAAACCGTCATGCCGCTCGTTTCCGCCCTGCTCAAACCATCAGGCTTTTTCGCCT TCTCGGTGGAGGATGCGGGCGATGAGCAAGGTTTCGTCCTGCGGGAATCCCTTCGTTACGCGCATTCCAAGAGCTACGTG ATCGATCTCCTTGAACGGTCGGGCTTTTCCCCCATGGAAATCCGCAAAACCACCATTCGCAAGGATGCCGGAAAACCCCT TTCCGGCATTCTTTTTCTTGCCCGTGCCAAAGCCTGA
Upstream 100 bases:
>100_bases CCCAAACCAGTTTTCTTCCGGTGACGTCATTGCCGACCGCCGGGCGGACTATGCCCGCATGTTGGCGGAGAGCGGTGATT ATCCCGCCGCCGCCGAACTT
Downstream 100 bases:
>100_bases ACATTCCGTTTCTTGCCTTTTTTACGATAGGTCAGGCTTGCTTACGTATCCATCTTGATCAGGTGTTTTTTGCAGTGCAA AATGTGCCGGAAACCTGAGG
Product: methyltransferase
Products: NA
Alternate protein names: Methyltransferase; 3-Demethylubiquinone-9 3-Methyltransferase; Methyltransferase Protein; SAM-Dependent Methyltransferase; TPR Repeat-Containing Protein; SAM-Dependent Methyltransferases; LOW QUALITY PROTEIN Methyltransferase; Protein With TPR Motifs; TPR Repeat-Containing Methyltransferase; Two Domain Fusion Protein; Methyltransferase Domain Family; Methyltransferase Domain Family Protein
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MEQALELAPRWTAGWFRFGEYHEKAGETAKAVAAYEKVAELDAEGLFAAELKLAVLGAAETPEQPPSRYVEGLFDDYADR FETSLVEKLDYSVPQKLAELIGKAATGDAFDTIVDIGCGTGLLGIEIRSLAKRLEGFDISQNMLAKADEKSLYDHLGQAD LSLDAEASGLFTPVLTQHRADLVAAADVMMYLGSLETVMPLVSALLKPSGFFAFSVEDAGDEQGFVLRESLRYAHSKSYV IDLLERSGFSPMEIRKTTIRKDAGKPLSGILFLARAKA
Sequences:
>Translated_278_residues MEQALELAPRWTAGWFRFGEYHEKAGETAKAVAAYEKVAELDAEGLFAAELKLAVLGAAETPEQPPSRYVEGLFDDYADR FETSLVEKLDYSVPQKLAELIGKAATGDAFDTIVDIGCGTGLLGIEIRSLAKRLEGFDISQNMLAKADEKSLYDHLGQAD LSLDAEASGLFTPVLTQHRADLVAAADVMMYLGSLETVMPLVSALLKPSGFFAFSVEDAGDEQGFVLRESLRYAHSKSYV IDLLERSGFSPMEIRKTTIRKDAGKPLSGILFLARAKA >Mature_278_residues MEQALELAPRWTAGWFRFGEYHEKAGETAKAVAAYEKVAELDAEGLFAAELKLAVLGAAETPEQPPSRYVEGLFDDYADR FETSLVEKLDYSVPQKLAELIGKAATGDAFDTIVDIGCGTGLLGIEIRSLAKRLEGFDISQNMLAKADEKSLYDHLGQAD LSLDAEASGLFTPVLTQHRADLVAAADVMMYLGSLETVMPLVSALLKPSGFFAFSVEDAGDEQGFVLRESLRYAHSKSYV IDLLERSGFSPMEIRKTTIRKDAGKPLSGILFLARAKA
Specific function: Unknown
COG id: COG4976
COG function: function code R; Predicted methyltransferase (contains TPR repeat)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30266; Mature: 30266
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQALELAPRWTAGWFRFGEYHEKAGETAKAVAAYEKVAELDAEGLFAAELKLAVLGAAE CCCHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEECCC TPEQPPSRYVEGLFDDYADRFETSLVEKLDYSVPQKLAELIGKAATGDAFDTIVDIGCGT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCC GLLGIEIRSLAKRLEGFDISQNMLAKADEKSLYDHLGQADLSLDAEASGLFTPVLTQHRA CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH DLVAAADVMMYLGSLETVMPLVSALLKPSGFFAFSVEDAGDEQGFVLRESLRYAHSKSYV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHH IDLLERSGFSPMEIRKTTIRKDAGKPLSGILFLARAKA HHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCC >Mature Secondary Structure MEQALELAPRWTAGWFRFGEYHEKAGETAKAVAAYEKVAELDAEGLFAAELKLAVLGAAE CCCHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEECCC TPEQPPSRYVEGLFDDYADRFETSLVEKLDYSVPQKLAELIGKAATGDAFDTIVDIGCGT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCC GLLGIEIRSLAKRLEGFDISQNMLAKADEKSLYDHLGQADLSLDAEASGLFTPVLTQHRA CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH DLVAAADVMMYLGSLETVMPLVSALLKPSGFFAFSVEDAGDEQGFVLRESLRYAHSKSYV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHH IDLLERSGFSPMEIRKTTIRKDAGKPLSGILFLARAKA HHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA