Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

Click here to switch to the map view.

The map label for this gene is 159184337

Identifier: 159184337

GI number: 159184337

Start: 477406

End: 478017

Strand: Direct

Name: 159184337

Synonym: Atu0490

Alternate gene names: NA

Gene position: 477406-478017 (Clockwise)

Preceding gene: 159184336

Following gene: 159184338

Centisome position: 16.8

GC content: 58.33

Gene sequence:

>612_bases
ATGTGGAGTTCCGATCCGGCCAGACATGCGCCGGTGGAAGACGTGCAGGGCATCGTCACCGGTGCCATCGTCTCGGCGCT
CGGCTTTTATCTCTTGGCCAAGGTCGGTCTTTTGACCGGCGGCACGGCTGGTGTTGCCTTTCTCCTTCATTATGCCTTCG
GCATCAGCTTTGGCCTGCTGTTCTTCCTCGTCAACCTGCCCTTCTATTATCTGTCGTTCCGCCGCCTCGGTCTCGCCTTT
TCATGCAAGACCTTCATCGCCATCGGCCTTGTTTCGGTGCTGACGGAAGTGGAAGCGCGCTGGATGGTCATCGACAGCAT
CAACCCGCTCTGGGCGGCTCTGCTCGGTGGTCTGCTTCTGGGTTACGGATTGCTGGCGCTTTATCGCCACCGCGCCAGCC
TCGGCGGCATCGGCATTCTGGCCATCTATATTCAGGATCGTTTCGGCATCCGCGCCGGTCTCATCCAGTTGGCCTTTGAT
GCCTGCGTCATGCTGTGCGCCTTCCTCGTCATCGATCCCGCAACCGTTGCCTATTCGATTGTCGGCGCTTTCGTCCTCAA
CATATTCCTCGCCATCAACCATCGCTCGGACAGATACATCGTCGTGCGTTAA

Upstream 100 bases:

>100_bases
GCTTGCTTACGTATCCATCTTGATCAGGTGTTTTTTGCAGTGCAAAATGTGCCGGAAACCTGAGGGAAAAAGCGTGAGCA
CAACGAGAAGCGTTTACGGG

Downstream 100 bases:

>100_bases
GCCTGACCGCTTGAAATTTGTCAGGCTTGGGCGCAATAGCTGGGCAAGGTCGGGCCAGATCGGGCAAGTCAGGGGAAGAT
GCATGGACGATACCAGTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MWSSDPARHAPVEDVQGIVTGAIVSALGFYLLAKVGLLTGGTAGVAFLLHYAFGISFGLLFFLVNLPFYYLSFRRLGLAF
SCKTFIAIGLVSVLTEVEARWMVIDSINPLWAALLGGLLLGYGLLALYRHRASLGGIGILAIYIQDRFGIRAGLIQLAFD
ACVMLCAFLVIDPATVAYSIVGAFVLNIFLAINHRSDRYIVVR

Sequences:

>Translated_203_residues
MWSSDPARHAPVEDVQGIVTGAIVSALGFYLLAKVGLLTGGTAGVAFLLHYAFGISFGLLFFLVNLPFYYLSFRRLGLAF
SCKTFIAIGLVSVLTEVEARWMVIDSINPLWAALLGGLLLGYGLLALYRHRASLGGIGILAIYIQDRFGIRAGLIQLAFD
ACVMLCAFLVIDPATVAYSIVGAFVLNIFLAINHRSDRYIVVR
>Mature_203_residues
MWSSDPARHAPVEDVQGIVTGAIVSALGFYLLAKVGLLTGGTAGVAFLLHYAFGISFGLLFFLVNLPFYYLSFRRLGLAF
SCKTFIAIGLVSVLTEVEARWMVIDSINPLWAALLGGLLLGYGLLALYRHRASLGGIGILAIYIQDRFGIRAGLIQLAFD
ACVMLCAFLVIDPATVAYSIVGAFVLNIFLAINHRSDRYIVVR

Specific function: Unknown

COG id: COG1284

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22023; Mature: 22023

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWSSDPARHAPVEDVQGIVTGAIVSALGFYLLAKVGLLTGGTAGVAFLLHYAFGISFGLL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
FFLVNLPFYYLSFRRLGLAFSCKTFIAIGLVSVLTEVEARWMVIDSINPLWAALLGGLLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHH
GYGLLALYRHRASLGGIGILAIYIQDRFGIRAGLIQLAFDACVMLCAFLVIDPATVAYSI
HHHHHHHHHHHHCCCCCEEEEEEEEHHHCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
VGAFVLNIFLAINHRSDRYIVVR
HHHHHHHHHHHHCCCCCCEEEEC
>Mature Secondary Structure
MWSSDPARHAPVEDVQGIVTGAIVSALGFYLLAKVGLLTGGTAGVAFLLHYAFGISFGLL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
FFLVNLPFYYLSFRRLGLAFSCKTFIAIGLVSVLTEVEARWMVIDSINPLWAALLGGLLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHH
GYGLLALYRHRASLGGIGILAIYIQDRFGIRAGLIQLAFDACVMLCAFLVIDPATVAYSI
HHHHHHHHHHHHCCCCCEEEEEEEEHHHCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
VGAFVLNIFLAINHRSDRYIVVR
HHHHHHHHHHHHCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA