Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184333
Identifier: 159184333
GI number: 159184333
Start: 473913
End: 474266
Strand: Direct
Name: 159184333
Synonym: Atu0485
Alternate gene names: NA
Gene position: 473913-474266 (Clockwise)
Preceding gene: 15887829
Following gene: 159184334
Centisome position: 16.68
GC content: 57.34
Gene sequence:
>354_bases ATGCAGGAAACGCCCGCGATCATCTATAAAATCGTGCCGGAGACGTTGTGGACTGCAGCCAGGGCAGAAGGCATGTTCGA AGGTGCGGCCATCGACTTGACCGACGGTTTCATTCATTTTTCGACTGCAAAGCAGGTGGCAGAGACAGCCGCGCGGCATT TTTCCGGCCAGGTGGATCTGCTTCTGATCGCGGTCGACGGTGCAGCACTTGGCGACAAGCTGGTCTATGAACCGTCCCGG GGTGGTGATCTTTTCCCGCATCTTTACGCCCCGCTTCCCTTCAGCGCGGTCCTTTGGGAAACGCCGCTCTCGCTTGATCA TGATGGCCAGCACCAGTTCCCGGAGATTTTGTGA
Upstream 100 bases:
>100_bases GGGCCTCCGTAATAAAAATGCCGTGGAAACTGTGGACAATCTTCCTGCTTTGCGGCAAACCGCCCGGACAGGAAAGCGCT GGAAAGCCTTGGAGAGCCTT
Downstream 100 bases:
>100_bases TGAGCGGATTATTTTCCTCTGTCGGCCGCAAGGGCCTGTTTCTCATCGATCCGGAAAAGGCGCACGGGCTCTCCGTTGCG GCGCTGAAAAGCGGCTTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MQETPAIIYKIVPETLWTAARAEGMFEGAAIDLTDGFIHFSTAKQVAETAARHFSGQVDLLLIAVDGAALGDKLVYEPSR GGDLFPHLYAPLPFSAVLWETPLSLDHDGQHQFPEIL
Sequences:
>Translated_117_residues MQETPAIIYKIVPETLWTAARAEGMFEGAAIDLTDGFIHFSTAKQVAETAARHFSGQVDLLLIAVDGAALGDKLVYEPSR GGDLFPHLYAPLPFSAVLWETPLSLDHDGQHQFPEIL >Mature_117_residues MQETPAIIYKIVPETLWTAARAEGMFEGAAIDLTDGFIHFSTAKQVAETAARHFSGQVDLLLIAVDGAALGDKLVYEPSR GGDLFPHLYAPLPFSAVLWETPLSLDHDGQHQFPEIL
Specific function: Unknown
COG id: COG3502
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12777; Mature: 12777
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQETPAIIYKIVPETLWTAARAEGMFEGAAIDLTDGFIHFSTAKQVAETAARHFSGQVDL CCCCCCHHEEHHHHHHHHHHHHCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHCCCCEEE LLIAVDGAALGDKLVYEPSRGGDLFPHLYAPLPFSAVLWETPLSLDHDGQHQFPEIL EEEEECCCCCCCCEEECCCCCCCCCCHHCCCCCCHHHEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MQETPAIIYKIVPETLWTAARAEGMFEGAAIDLTDGFIHFSTAKQVAETAARHFSGQVDL CCCCCCHHEEHHHHHHHHHHHHCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHCCCCEEE LLIAVDGAALGDKLVYEPSRGGDLFPHLYAPLPFSAVLWETPLSLDHDGQHQFPEIL EEEEECCCCCCCCEEECCCCCCCCCCHHCCCCCCHHHEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA