Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is scrK [H]

Identifier: 159184294

GI number: 159184294

Start: 395635

End: 396561

Strand: Direct

Name: scrK [H]

Synonym: Atu0401

Alternate gene names: 159184294

Gene position: 395635-396561 (Clockwise)

Preceding gene: 159184293

Following gene: 159184295

Centisome position: 13.92

GC content: 61.38

Gene sequence:

>927_bases
ATGATCCTGTGTTGTGGTGAAGCCCTGATCGACATGCTGCCCCGGCAGACGACGCTGGGTGAGGCGGGCTTTGCCCCTTA
CGCAGGCGGAGCGGTCTTCAACACGGCAATTGCGCTGGGGCGTCTTGGCGTCCCTTCAGCCTTTTTTACCGGTCTTTCCG
ACGACATGATGGGCGATATCCTGCGGGAGACCCTGCGGGCCAGCAAGGTGGATTTCAGCTATTGCGCCACCCTGTCGCGC
CCCACCACCATTGCGTTCGTTAAGCTGGTTGATGGCCATGCGACCTACGCTTTTTACGACGAGAACACCGCCGGCCGGAT
GATCACCGAGGCCGAACTTCCGGCCTTGGGAGCGGATTGCGAAGCGCTGCATTTCGGCGCCATCAGCCTTATTCCCGAAC
CCTGCGGCAGCACCTATGAGGCGCTGATGACGCGCGAGCATGAGACCCGCGTCATCTCGCTCGATCCGAACATTCGTCCC
GGCTTCATCCAGAACAAGCAGTCGCACATGGCCCGCATCCGCCGCATGGCGGCGATGTCTGACATCGTCAAGTTCTCGGA
TGAGGACCTGGCGTGGTTCGGTCTGGAAGGCGACGAGGACACGCTTGCCCGCCACTGGCTGCACCACGGTGCAAAACTCG
TCGTTGTCACCCGTGGCGCCAAGGGTGCCGTGGGTTACAGCGCCAATCTCAAGGTGGAAGTGGCCTCCGAGCGCGTCGAA
GTGGTCGATACGGTCGGCGCCGGCGATACGTTCGATGCCGGCATTCTTGCTTCGCTGAAAATGCAGGGCCTGCTGACCAA
AGCGCAGGTGGCTTCGCTGAGCGAAGAGCAGATCAGAAAAGCTTTGGCGCTTGGCGCGAAAGCCGCTGCGGTCACTGTCT
CGCGGGCTGGCGCAAATCCGCCTTTCGCGCATGAAATCGGTTTGTGA

Upstream 100 bases:

>100_bases
ATTTCGGATGCGGCCAGTCCAGCTTGTGGCTGGCCTTCCGATCGATCTTCGTCTAAATCGATTTAAGTTCATTTGATTTG
CTGTTTTGAGGAGGACCGTA

Downstream 100 bases:

>100_bases
AGGGCACGGTTGAGCCATTTTGAAAAGGTGGTTCAACACTCTTCCCGGCGCTAGAGCCGTAAAAAACCGTAATTTCGCGA
TTATCAAGCTTGTCTCCGCT

Product: fructokinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MILCCGEALIDMLPRQTTLGEAGFAPYAGGAVFNTAIALGRLGVPSAFFTGLSDDMMGDILRETLRASKVDFSYCATLSR
PTTIAFVKLVDGHATYAFYDENTAGRMITEAELPALGADCEALHFGAISLIPEPCGSTYEALMTREHETRVISLDPNIRP
GFIQNKQSHMARIRRMAAMSDIVKFSDEDLAWFGLEGDEDTLARHWLHHGAKLVVVTRGAKGAVGYSANLKVEVASERVE
VVDTVGAGDTFDAGILASLKMQGLLTKAQVASLSEEQIRKALALGAKAAAVTVSRAGANPPFAHEIGL

Sequences:

>Translated_308_residues
MILCCGEALIDMLPRQTTLGEAGFAPYAGGAVFNTAIALGRLGVPSAFFTGLSDDMMGDILRETLRASKVDFSYCATLSR
PTTIAFVKLVDGHATYAFYDENTAGRMITEAELPALGADCEALHFGAISLIPEPCGSTYEALMTREHETRVISLDPNIRP
GFIQNKQSHMARIRRMAAMSDIVKFSDEDLAWFGLEGDEDTLARHWLHHGAKLVVVTRGAKGAVGYSANLKVEVASERVE
VVDTVGAGDTFDAGILASLKMQGLLTKAQVASLSEEQIRKALALGAKAAAVTVSRAGANPPFAHEIGL
>Mature_308_residues
MILCCGEALIDMLPRQTTLGEAGFAPYAGGAVFNTAIALGRLGVPSAFFTGLSDDMMGDILRETLRASKVDFSYCATLSR
PTTIAFVKLVDGHATYAFYDENTAGRMITEAELPALGADCEALHFGAISLIPEPCGSTYEALMTREHETRVISLDPNIRP
GFIQNKQSHMARIRRMAAMSDIVKFSDEDLAWFGLEGDEDTLARHWLHHGAKLVVVTRGAKGAVGYSANLKVEVASERVE
VVDTVGAGDTFDAGILASLKMQGLLTKAQVASLSEEQIRKALALGAKAAAVTVSRAGANPPFAHEIGL

Specific function: Unknown

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: =2.7.1.4 [H]

Molecular weight: Translated: 32862; Mature: 32862

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILCCGEALIDMLPRQTTLGEAGFAPYAGGAVFNTAIALGRLGVPSAFFTGLSDDMMGDI
CEEECCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHCCCHHHHHHH
LRETLRASKVDFSYCATLSRPTTIAFVKLVDGHATYAFYDENTAGRMITEAELPALGADC
HHHHHHHHCCCHHHHHHCCCCCEEEEEEEECCCEEEEEEECCCCCCEEEECCCCCCCCCC
EALHFGAISLIPEPCGSTYEALMTREHETRVISLDPNIRPGFIQNKQSHMARIRRMAAMS
CEEECCEEEECCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH
DIVKFSDEDLAWFGLEGDEDTLARHWLHHGAKLVVVTRGAKGAVGYSANLKVEVASERVE
HHHHCCCCCEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEECCCCEE
VVDTVGAGDTFDAGILASLKMQGLLTKAQVASLSEEQIRKALALGAKAAAVTVSRAGANP
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHEEEEECCCCCC
PFAHEIGL
CCHHCCCC
>Mature Secondary Structure
MILCCGEALIDMLPRQTTLGEAGFAPYAGGAVFNTAIALGRLGVPSAFFTGLSDDMMGDI
CEEECCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHCCCHHHHHHH
LRETLRASKVDFSYCATLSRPTTIAFVKLVDGHATYAFYDENTAGRMITEAELPALGADC
HHHHHHHHCCCHHHHHHCCCCCEEEEEEEECCCEEEEEEECCCCCCEEEECCCCCCCCCC
EALHFGAISLIPEPCGSTYEALMTREHETRVISLDPNIRPGFIQNKQSHMARIRRMAAMS
CEEECCEEEECCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH
DIVKFSDEDLAWFGLEGDEDTLARHWLHHGAKLVVVTRGAKGAVGYSANLKVEVASERVE
HHHHCCCCCEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEECCCCEE
VVDTVGAGDTFDAGILASLKMQGLLTKAQVASLSEEQIRKALALGAKAAAVTVSRAGANP
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHEEEEECCCCCC
PFAHEIGL
CCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8932706 [H]