Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is scrK [H]
Identifier: 159184294
GI number: 159184294
Start: 395635
End: 396561
Strand: Direct
Name: scrK [H]
Synonym: Atu0401
Alternate gene names: 159184294
Gene position: 395635-396561 (Clockwise)
Preceding gene: 159184293
Following gene: 159184295
Centisome position: 13.92
GC content: 61.38
Gene sequence:
>927_bases ATGATCCTGTGTTGTGGTGAAGCCCTGATCGACATGCTGCCCCGGCAGACGACGCTGGGTGAGGCGGGCTTTGCCCCTTA CGCAGGCGGAGCGGTCTTCAACACGGCAATTGCGCTGGGGCGTCTTGGCGTCCCTTCAGCCTTTTTTACCGGTCTTTCCG ACGACATGATGGGCGATATCCTGCGGGAGACCCTGCGGGCCAGCAAGGTGGATTTCAGCTATTGCGCCACCCTGTCGCGC CCCACCACCATTGCGTTCGTTAAGCTGGTTGATGGCCATGCGACCTACGCTTTTTACGACGAGAACACCGCCGGCCGGAT GATCACCGAGGCCGAACTTCCGGCCTTGGGAGCGGATTGCGAAGCGCTGCATTTCGGCGCCATCAGCCTTATTCCCGAAC CCTGCGGCAGCACCTATGAGGCGCTGATGACGCGCGAGCATGAGACCCGCGTCATCTCGCTCGATCCGAACATTCGTCCC GGCTTCATCCAGAACAAGCAGTCGCACATGGCCCGCATCCGCCGCATGGCGGCGATGTCTGACATCGTCAAGTTCTCGGA TGAGGACCTGGCGTGGTTCGGTCTGGAAGGCGACGAGGACACGCTTGCCCGCCACTGGCTGCACCACGGTGCAAAACTCG TCGTTGTCACCCGTGGCGCCAAGGGTGCCGTGGGTTACAGCGCCAATCTCAAGGTGGAAGTGGCCTCCGAGCGCGTCGAA GTGGTCGATACGGTCGGCGCCGGCGATACGTTCGATGCCGGCATTCTTGCTTCGCTGAAAATGCAGGGCCTGCTGACCAA AGCGCAGGTGGCTTCGCTGAGCGAAGAGCAGATCAGAAAAGCTTTGGCGCTTGGCGCGAAAGCCGCTGCGGTCACTGTCT CGCGGGCTGGCGCAAATCCGCCTTTCGCGCATGAAATCGGTTTGTGA
Upstream 100 bases:
>100_bases ATTTCGGATGCGGCCAGTCCAGCTTGTGGCTGGCCTTCCGATCGATCTTCGTCTAAATCGATTTAAGTTCATTTGATTTG CTGTTTTGAGGAGGACCGTA
Downstream 100 bases:
>100_bases AGGGCACGGTTGAGCCATTTTGAAAAGGTGGTTCAACACTCTTCCCGGCGCTAGAGCCGTAAAAAACCGTAATTTCGCGA TTATCAAGCTTGTCTCCGCT
Product: fructokinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MILCCGEALIDMLPRQTTLGEAGFAPYAGGAVFNTAIALGRLGVPSAFFTGLSDDMMGDILRETLRASKVDFSYCATLSR PTTIAFVKLVDGHATYAFYDENTAGRMITEAELPALGADCEALHFGAISLIPEPCGSTYEALMTREHETRVISLDPNIRP GFIQNKQSHMARIRRMAAMSDIVKFSDEDLAWFGLEGDEDTLARHWLHHGAKLVVVTRGAKGAVGYSANLKVEVASERVE VVDTVGAGDTFDAGILASLKMQGLLTKAQVASLSEEQIRKALALGAKAAAVTVSRAGANPPFAHEIGL
Sequences:
>Translated_308_residues MILCCGEALIDMLPRQTTLGEAGFAPYAGGAVFNTAIALGRLGVPSAFFTGLSDDMMGDILRETLRASKVDFSYCATLSR PTTIAFVKLVDGHATYAFYDENTAGRMITEAELPALGADCEALHFGAISLIPEPCGSTYEALMTREHETRVISLDPNIRP GFIQNKQSHMARIRRMAAMSDIVKFSDEDLAWFGLEGDEDTLARHWLHHGAKLVVVTRGAKGAVGYSANLKVEVASERVE VVDTVGAGDTFDAGILASLKMQGLLTKAQVASLSEEQIRKALALGAKAAAVTVSRAGANPPFAHEIGL >Mature_308_residues MILCCGEALIDMLPRQTTLGEAGFAPYAGGAVFNTAIALGRLGVPSAFFTGLSDDMMGDILRETLRASKVDFSYCATLSR PTTIAFVKLVDGHATYAFYDENTAGRMITEAELPALGADCEALHFGAISLIPEPCGSTYEALMTREHETRVISLDPNIRP GFIQNKQSHMARIRRMAAMSDIVKFSDEDLAWFGLEGDEDTLARHWLHHGAKLVVVTRGAKGAVGYSANLKVEVASERVE VVDTVGAGDTFDAGILASLKMQGLLTKAQVASLSEEQIRKALALGAKAAAVTVSRAGANPPFAHEIGL
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: =2.7.1.4 [H]
Molecular weight: Translated: 32862; Mature: 32862
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILCCGEALIDMLPRQTTLGEAGFAPYAGGAVFNTAIALGRLGVPSAFFTGLSDDMMGDI CEEECCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHCCCHHHHHHH LRETLRASKVDFSYCATLSRPTTIAFVKLVDGHATYAFYDENTAGRMITEAELPALGADC HHHHHHHHCCCHHHHHHCCCCCEEEEEEEECCCEEEEEEECCCCCCEEEECCCCCCCCCC EALHFGAISLIPEPCGSTYEALMTREHETRVISLDPNIRPGFIQNKQSHMARIRRMAAMS CEEECCEEEECCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH DIVKFSDEDLAWFGLEGDEDTLARHWLHHGAKLVVVTRGAKGAVGYSANLKVEVASERVE HHHHCCCCCEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEECCCCEE VVDTVGAGDTFDAGILASLKMQGLLTKAQVASLSEEQIRKALALGAKAAAVTVSRAGANP EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHEEEEECCCCCC PFAHEIGL CCHHCCCC >Mature Secondary Structure MILCCGEALIDMLPRQTTLGEAGFAPYAGGAVFNTAIALGRLGVPSAFFTGLSDDMMGDI CEEECCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHCCCHHHHHHH LRETLRASKVDFSYCATLSRPTTIAFVKLVDGHATYAFYDENTAGRMITEAELPALGADC HHHHHHHHCCCHHHHHHCCCCCEEEEEEEECCCEEEEEEECCCCCCEEEECCCCCCCCCC EALHFGAISLIPEPCGSTYEALMTREHETRVISLDPNIRPGFIQNKQSHMARIRRMAAMS CEEECCEEEECCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH DIVKFSDEDLAWFGLEGDEDTLARHWLHHGAKLVVVTRGAKGAVGYSANLKVEVASERVE HHHHCCCCCEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEECCCCEE VVDTVGAGDTFDAGILASLKMQGLLTKAQVASLSEEQIRKALALGAKAAAVTVSRAGANP EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHEEEEECCCCCC PFAHEIGL CCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8932706 [H]