Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184295
Identifier: 159184295
GI number: 159184295
Start: 396686
End: 397651
Strand: Direct
Name: 159184295
Synonym: Atu0402
Alternate gene names: NA
Gene position: 396686-397651 (Clockwise)
Preceding gene: 159184294
Following gene: 15887752
Centisome position: 13.96
GC content: 60.04
Gene sequence:
>966_bases ATGAGCATTCCTAAAACCCATCCTTTCGATTTCGACCCCACTTATGGCATGCAGCGAGAGCAATTGCTCGCCATTACCCC GCCGGAAGCGCCGCCGGGTTTTGATGATTTCTGGAAGAAACGCTATCGCCGTGCGCTTGCGACAGATCCGCGACCGGTGC TGCGCCGGAGCAAGTTAACCCACCCCCGCTGGCAGGTCCTCGATGTGACCTATACATCCACTGACGGTTTCCGTATCGGC GGGTGGCTGCTTTTGCCGCGGGAGGGACAGGTGCGGCGCGGTCTCGTCGTTGGCCATGGTTATGGCGGACGCGGAGAGCC CGATTTCGATTTGCCCGTGGAAGAGACAGCCGTGCTTTTTCCCTGTTTTCGTGGGCTTTCACTCAGTGCCTGCCCGCCGA TCTCGTCCGATCCGACCCTGCATGTTCTCTACAATATCGACAGGAAGGATGACTACATCATCGGCGGTTGCGTTGATGAT CTGTGGGTCGCCGTCTCGACGCTCGTCAGCCTTTATCCCTGGCTGGAAGGGCAGGTGGGCTATAGCGGCATCAGCTTCGG CGGCGGCATCGGTGCCCTGGCCATCCCCTTCGACGCGCGCATCGACCGCGGTCATCTTGTCGTGCCGACCTTCGGCCACC GGCCGTTCTGGTTGACGCTGCCCACCGTTGGCAGCGCGGATGCGGTTCAGACCTATCAGAAGACCCACGCCAAGGTGCTC GAAACCCTGCGCCTGTTCGATGCCGCCTGCGCCGCCGCCCGCATAAAGGTGCCAATGCTCGTCGCGCCCGCGCTTTTTGA TCCGGCAGTGGCGCCGCCCTGCCAGTTCGCGGTGGCCAATGCCGTGCCGCAATCAAAATTTAATGAAATCTTCATCCTAG ACGCGGGCCATTTCGAATACCCTGACAGCGCATCGCAAGATGCGGTCCATAAGGACAAGATCAGACGGTTTTTAAAGGTG CCATGA
Upstream 100 bases:
>100_bases AAGGTGGTTCAACACTCTTCCCGGCGCTAGAGCCGTAAAAAACCGTAATTTCGCGATTATCAAGCTTGTCTCCGCTGTTC TTTCACGAAACAAGCGTCGC
Downstream 100 bases:
>100_bases AACGCGAATATCTCCGCTGGTACAGTCACAGGCTCCATCGCGACATGGAACTCCTGATATTTGGTCATGCCGGTGCGAAG GTGCTGATGTTCCCGACACG
Product: hypothetical protein
Products: NA
Alternate protein names: Deacetylase; Acetyl Esterase; Acetylesterase; Deacetylase Protein
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MSIPKTHPFDFDPTYGMQREQLLAITPPEAPPGFDDFWKKRYRRALATDPRPVLRRSKLTHPRWQVLDVTYTSTDGFRIG GWLLLPREGQVRRGLVVGHGYGGRGEPDFDLPVEETAVLFPCFRGLSLSACPPISSDPTLHVLYNIDRKDDYIIGGCVDD LWVAVSTLVSLYPWLEGQVGYSGISFGGGIGALAIPFDARIDRGHLVVPTFGHRPFWLTLPTVGSADAVQTYQKTHAKVL ETLRLFDAACAAARIKVPMLVAPALFDPAVAPPCQFAVANAVPQSKFNEIFILDAGHFEYPDSASQDAVHKDKIRRFLKV P
Sequences:
>Translated_321_residues MSIPKTHPFDFDPTYGMQREQLLAITPPEAPPGFDDFWKKRYRRALATDPRPVLRRSKLTHPRWQVLDVTYTSTDGFRIG GWLLLPREGQVRRGLVVGHGYGGRGEPDFDLPVEETAVLFPCFRGLSLSACPPISSDPTLHVLYNIDRKDDYIIGGCVDD LWVAVSTLVSLYPWLEGQVGYSGISFGGGIGALAIPFDARIDRGHLVVPTFGHRPFWLTLPTVGSADAVQTYQKTHAKVL ETLRLFDAACAAARIKVPMLVAPALFDPAVAPPCQFAVANAVPQSKFNEIFILDAGHFEYPDSASQDAVHKDKIRRFLKV P >Mature_320_residues SIPKTHPFDFDPTYGMQREQLLAITPPEAPPGFDDFWKKRYRRALATDPRPVLRRSKLTHPRWQVLDVTYTSTDGFRIGG WLLLPREGQVRRGLVVGHGYGGRGEPDFDLPVEETAVLFPCFRGLSLSACPPISSDPTLHVLYNIDRKDDYIIGGCVDDL WVAVSTLVSLYPWLEGQVGYSGISFGGGIGALAIPFDARIDRGHLVVPTFGHRPFWLTLPTVGSADAVQTYQKTHAKVLE TLRLFDAACAAARIKVPMLVAPALFDPAVAPPCQFAVANAVPQSKFNEIFILDAGHFEYPDSASQDAVHKDKIRRFLKVP
Specific function: Unknown
COG id: COG3458
COG function: function code Q; Acetyl esterase (deacetylase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35553; Mature: 35422
Theoretical pI: Translated: 7.59; Mature: 7.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIPKTHPFDFDPTYGMQREQLLAITPPEAPPGFDDFWKKRYRRALATDPRPVLRRSKLT CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCC HPRWQVLDVTYTSTDGFRIGGWLLLPREGQVRRGLVVGHGYGGRGEPDFDLPVEETAVLF CCCEEEEEEEEECCCCEEECCEEEECCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHH PCFRGLSLSACPPISSDPTLHVLYNIDRKDDYIIGGCVDDLWVAVSTLVSLYPWLEGQVG HHHCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCC YSGISFGGGIGALAIPFDARIDRGHLVVPTFGHRPFWLTLPTVGSADAVQTYQKTHAKVL CCCEECCCCCCEEEEECCCCCCCCCEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHH ETLRLFDAACAAARIKVPMLVAPALFDPAVAPPCQFAVANAVPQSKFNEIFILDAGHFEY HHHHHHHHHHHHHHCCCCEEEECHHCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCC PDSASQDAVHKDKIRRFLKVP CCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure SIPKTHPFDFDPTYGMQREQLLAITPPEAPPGFDDFWKKRYRRALATDPRPVLRRSKLT CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCC HPRWQVLDVTYTSTDGFRIGGWLLLPREGQVRRGLVVGHGYGGRGEPDFDLPVEETAVLF CCCEEEEEEEEECCCCEEECCEEEECCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHH PCFRGLSLSACPPISSDPTLHVLYNIDRKDDYIIGGCVDDLWVAVSTLVSLYPWLEGQVG HHHCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCC YSGISFGGGIGALAIPFDARIDRGHLVVPTFGHRPFWLTLPTVGSADAVQTYQKTHAKVL CCCEECCCCCCEEEEECCCCCCCCCEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHH ETLRLFDAACAAARIKVPMLVAPALFDPAVAPPCQFAVANAVPQSKFNEIFILDAGHFEY HHHHHHHHHHHHHHCCCCEEEECHHCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCC PDSASQDAVHKDKIRRFLKVP CCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA