Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184232
Identifier: 159184232
GI number: 159184232
Start: 251051
End: 251839
Strand: Reverse
Name: 159184232
Synonym: Atu0253
Alternate gene names: NA
Gene position: 251839-251051 (Counterclockwise)
Preceding gene: 159184235
Following gene: 159184231
Centisome position: 8.86
GC content: 60.96
Gene sequence:
>789_bases ATGACCGAACAAGCTGCTGAATTCCTGCATATAGGAATGGGCGAGGATGCCCGCAACATCGCCTTCCTCCATCGCCCAGC AACATCTCAGCCGGATGCACCCACGCTCGTCTGGCTCGGCGGCTATCGCTCCGACATGACGGGAACCAAAGCGGTTGAAC TCGATCGCTTCGCAGCGGAAAACGGCCTTGCCTGCCTGCGGCTCGATTATTCCGGCCACGGCGCTTCCGGCGGCGATTTC AACAAAGGCACGATCTCGCGATGGCTCGAAGAGGCACTTGCAGTAGTGCGCGCCAAGGCATCGTCGCGCGTCGTTCTCGT CGGCTCGTCGATGGGCGGGTGGATTGCGTTGCGCATGATCGAGGAGTTGCGCAAGTCGGGTGGCGCGCCCTCGGTCGCCG GTCTGGTTCTCATCGCGCCTGCGCCCGATTTCACGCAGGAACTGATAGAGCCCAGCCTTTCGGACGCGGAAAAGACCTCT CTCGCAGAGCGGGGTTATTTCGAGGAACATTCGGACTATAGCCCCGAGCCCAACATCTTCACCCGCGCGCTGATGGAAGA CGGAAAGCAGAACCGTGTGCTCACGGGCATCATCACCACCGGCTGCCCGGTTCATGTTCTGCAGGGCATGCGCGATCCCG ATGTTCCCTATCAGCATGCGCTAAAGCTCATCGAACATCTTCCGTCCGACGATGTCGTGCTGACGTTGATCCGCGACGGC GACCACCGGCTTTCCCGGCCGCAGGATATCGAGCGGATGCTCGCGGCCGTCAAAGCCCTTGCAATATAG
Upstream 100 bases:
>100_bases GCGAAGTCAATAGCATATCTGCCCGAAAAGATCACCTGTTGCCACGGTTTTTGCAAATACGCCGCCGATATTGCACGAAA ATCAGGAGAACTGCATATAC
Downstream 100 bases:
>100_bases GCATTTGCGCAACGCTCTTAACCATATTCAACGAGTCTTGCGCGCCATCGATTGCTAATGATTGACTCCTACCCCCCATC CCTCTTAACTTTTCGTTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MTEQAAEFLHIGMGEDARNIAFLHRPATSQPDAPTLVWLGGYRSDMTGTKAVELDRFAAENGLACLRLDYSGHGASGGDF NKGTISRWLEEALAVVRAKASSRVVLVGSSMGGWIALRMIEELRKSGGAPSVAGLVLIAPAPDFTQELIEPSLSDAEKTS LAERGYFEEHSDYSPEPNIFTRALMEDGKQNRVLTGIITTGCPVHVLQGMRDPDVPYQHALKLIEHLPSDDVVLTLIRDG DHRLSRPQDIERMLAAVKALAI
Sequences:
>Translated_262_residues MTEQAAEFLHIGMGEDARNIAFLHRPATSQPDAPTLVWLGGYRSDMTGTKAVELDRFAAENGLACLRLDYSGHGASGGDF NKGTISRWLEEALAVVRAKASSRVVLVGSSMGGWIALRMIEELRKSGGAPSVAGLVLIAPAPDFTQELIEPSLSDAEKTS LAERGYFEEHSDYSPEPNIFTRALMEDGKQNRVLTGIITTGCPVHVLQGMRDPDVPYQHALKLIEHLPSDDVVLTLIRDG DHRLSRPQDIERMLAAVKALAI >Mature_261_residues TEQAAEFLHIGMGEDARNIAFLHRPATSQPDAPTLVWLGGYRSDMTGTKAVELDRFAAENGLACLRLDYSGHGASGGDFN KGTISRWLEEALAVVRAKASSRVVLVGSSMGGWIALRMIEELRKSGGAPSVAGLVLIAPAPDFTQELIEPSLSDAEKTSL AERGYFEEHSDYSPEPNIFTRALMEDGKQNRVLTGIITTGCPVHVLQGMRDPDVPYQHALKLIEHLPSDDVVLTLIRDGD HRLSRPQDIERMLAAVKALAI
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI8923001, Length=257, Percent_Identity=28.7937743190661, Blast_Score=114, Evalue=1e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28486; Mature: 28355
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEQAAEFLHIGMGEDARNIAFLHRPATSQPDAPTLVWLGGYRSDMTGTKAVELDRFAAE CCHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHC NGLACLRLDYSGHGASGGDFNKGTISRWLEEALAVVRAKASSRVVLVGSSMGGWIALRMI CCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHH EELRKSGGAPSVAGLVLIAPAPDFTQELIEPSLSDAEKTSLAERGYFEEHSDYSPEPNIF HHHHHCCCCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHH TRALMEDGKQNRVLTGIITTGCPVHVLQGMRDPDVPYQHALKLIEHLPSDDVVLTLIRDG HHHHHHCCCCCCEEEEEECCCCHHHHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECC DHRLSRPQDIERMLAAVKALAI CCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure TEQAAEFLHIGMGEDARNIAFLHRPATSQPDAPTLVWLGGYRSDMTGTKAVELDRFAAE CHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHC NGLACLRLDYSGHGASGGDFNKGTISRWLEEALAVVRAKASSRVVLVGSSMGGWIALRMI CCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHH EELRKSGGAPSVAGLVLIAPAPDFTQELIEPSLSDAEKTSLAERGYFEEHSDYSPEPNIF HHHHHCCCCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHH TRALMEDGKQNRVLTGIITTGCPVHVLQGMRDPDVPYQHALKLIEHLPSDDVVLTLIRDG HHHHHHCCCCCCEEEEEECCCCHHHHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECC DHRLSRPQDIERMLAAVKALAI CCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA