Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 159184231

Identifier: 159184231

GI number: 159184231

Start: 250317

End: 250832

Strand: Reverse

Name: 159184231

Synonym: Atu0252

Alternate gene names: NA

Gene position: 250832-250317 (Counterclockwise)

Preceding gene: 159184232

Following gene: 159184230

Centisome position: 8.83

GC content: 58.91

Gene sequence:

>516_bases
ATGGTAACGGGCGGGATCACGTCCCAGCCAATCGGCCATTACGAGTTCTGTCAGAAATACGCCGACGAGTGCAACATCCG
CAGCAAGGTGACACCGCCGCCGCGCGTCACCGACTATGGCTGGGGCGTCATTCGCGAGATCAATACTTCCGTTAACACCA
CCATCGTGGCGATGACCGACCAGGAAATCTACGGCAAGGACGAGGTCTGGGAATATCCGACGACCGCCGGCGACTGCGAA
GATTTCGTGCTGCTGAAGCGCAAGAAGCTGATCGAGCGCGGGTTTTCCGTGGCCGATCTGCTGATCACCGTCGTCCGCAA
GCCTGACGGAGAAGGCCATGCCGTGCTGACGCTTCGCACCACGGATGGAGATTATATTCTCGACAACCTCACCGACGACG
TGAAGCTGTGGACCGACACCAACTACACCTATCTGAAGCGGCAGGCGTCCTTCAATACGGGCCGCTGGATTTCCATCGAA
GATGGTCGCGACGTTCTGGTCGGCGCGTTGCGCTGA

Upstream 100 bases:

>100_bases
CATGATGAACGCACCGCTGGCGCGTGCTCTGCTGTTTGCAGTTGCTGCCGGGCTAATGACTGCTGCCTCCGCCATGGCGG
AAATCAAGGGAAGCCCTTCC

Downstream 100 bases:

>100_bases
CACTCAAATTCCAAGTCTGATAGAATTCTGATTGAGCCCGCCATCGCGGGCTCTTTCTTTTTTTTCACGCGTTGCCGATG
ATAATGCCGGCCGCCAGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: Transglutaminase-Like Cysteine Peptidase BTLCP; Transglutaminase Family Protein Cysteine Peptidase Btlcp; And 4.1 Domain Protein; Peptide Signal; Signal Peptide; Transglutaminase Cysteine Peptidase BTLCP; Transglutaminase-Like Cysteine Peptidase; Transglutaminase-Like Protein; Bacterial Transglutaminase-Like Cysteine Peptidase

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MVTGGITSQPIGHYEFCQKYADECNIRSKVTPPPRVTDYGWGVIREINTSVNTTIVAMTDQEIYGKDEVWEYPTTAGDCE
DFVLLKRKKLIERGFSVADLLITVVRKPDGEGHAVLTLRTTDGDYILDNLTDDVKLWTDTNYTYLKRQASFNTGRWISIE
DGRDVLVGALR

Sequences:

>Translated_171_residues
MVTGGITSQPIGHYEFCQKYADECNIRSKVTPPPRVTDYGWGVIREINTSVNTTIVAMTDQEIYGKDEVWEYPTTAGDCE
DFVLLKRKKLIERGFSVADLLITVVRKPDGEGHAVLTLRTTDGDYILDNLTDDVKLWTDTNYTYLKRQASFNTGRWISIE
DGRDVLVGALR
>Mature_171_residues
MVTGGITSQPIGHYEFCQKYADECNIRSKVTPPPRVTDYGWGVIREINTSVNTTIVAMTDQEIYGKDEVWEYPTTAGDCE
DFVLLKRKKLIERGFSVADLLITVVRKPDGEGHAVLTLRTTDGDYILDNLTDDVKLWTDTNYTYLKRQASFNTGRWISIE
DGRDVLVGALR

Specific function: Unknown

COG id: COG3672

COG function: function code S; Predicted periplasmic protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19343; Mature: 19343

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTGGITSQPIGHYEFCQKYADECNIRSKVTPPPRVTDYGWGVIREINTSVNTTIVAMTD
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEC
QEIYGKDEVWEYPTTAGDCEDFVLLKRKKLIERGFSVADLLITVVRKPDGEGHAVLTLRT
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEEEE
TDGDYILDNLTDDVKLWTDTNYTYLKRQASFNTGRWISIEDGRDVLVGALR
CCCCEEECCCCCCEEEEECCCEEEEEEECCCCCCCEEEEECCCEEEEEECC
>Mature Secondary Structure
MVTGGITSQPIGHYEFCQKYADECNIRSKVTPPPRVTDYGWGVIREINTSVNTTIVAMTD
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEC
QEIYGKDEVWEYPTTAGDCEDFVLLKRKKLIERGFSVADLLITVVRKPDGEGHAVLTLRT
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEEEE
TDGDYILDNLTDDVKLWTDTNYTYLKRQASFNTGRWISIEDGRDVLVGALR
CCCCEEECCCCCCEEEEECCCEEEEEEECCCCCCCEEEEECCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA