Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 159184230

Identifier: 159184230

GI number: 159184230

Start: 248655

End: 249062

Strand: Reverse

Name: 159184230

Synonym: Atu0250

Alternate gene names: NA

Gene position: 249062-248655 (Counterclockwise)

Preceding gene: 159184231

Following gene: 15887599

Centisome position: 8.76

GC content: 55.88

Gene sequence:

>408_bases
ATGGCTGAGATCGGCGTCGACGCCGCTTTCATCGATCTGCTGGTGGAGACCTTTTACGGCCGTGTTCTTGAACACCAGAC
GCTTGGCCCTGTTTTCGATGCACGGCTTGCCGGGCGCTGGCCGGAACATATGGCCAGGATGAAACAGTTCTGGACGGCTA
TCGCCTTCAAGAATGGTAGCTATGGTGGCAAACCCGTGCAGGCGCATCTGGGGGTGCAAGGCATGTCGGCGGAGCTTTTT
CCTCAATGGCTCGCACTTTTTTCAGTGACGCTCGATGACATCGCACCGAGCAGGAAGGCGCATGACTGGTTCATGGAAAC
GGCGGAACGCATCGCCAGAAGCCTGACGCTTTCGCTGTTTTATAATCCTGCAATGGATGACCCGGCGGTAAAACGCAGTA
GGTCTTAA

Upstream 100 bases:

>100_bases
CGCTGCGCGGTAAATTTGCCAAAAAGGAAAGACGATGCAGTATCAAATTGCAGGGCGAGCCGTCCACAATGCGGAAATTC
AGGACAGAGCGGAAAAGGCC

Downstream 100 bases:

>100_bases
GGCAAAGAAAGAGCCACGCGAGTTTCAATATTCCCTCTTGATGGCCGCAGGGATAAATGTTTAGTAGCCAGCGGGAGGCG
TACCGTGCGGTTCGCCTGTA

Product: hypothetical protein

Products: NA

Alternate protein names: SEC-Independent Protein Translocase Protein TatC; Globin-Like Protein; Truncated Hemoglobin-Like Protein; Protozoan/Cyanobacterial Globin Family Protein; Truncated Hemoglobin; Sec-Independent Protein Translocase Protein TatC; Sec-Independent Protein Translocase; Truncated Hemoglobin Protein; Globin Family Protein; Sec-Independent Protein Translocase Protein Tatc; Truncated Hemoglobins; Hemoglobin; Sec-Independent Protein Translocase Protein

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MAEIGVDAAFIDLLVETFYGRVLEHQTLGPVFDARLAGRWPEHMARMKQFWTAIAFKNGSYGGKPVQAHLGVQGMSAELF
PQWLALFSVTLDDIAPSRKAHDWFMETAERIARSLTLSLFYNPAMDDPAVKRSRS

Sequences:

>Translated_135_residues
MAEIGVDAAFIDLLVETFYGRVLEHQTLGPVFDARLAGRWPEHMARMKQFWTAIAFKNGSYGGKPVQAHLGVQGMSAELF
PQWLALFSVTLDDIAPSRKAHDWFMETAERIARSLTLSLFYNPAMDDPAVKRSRS
>Mature_134_residues
AEIGVDAAFIDLLVETFYGRVLEHQTLGPVFDARLAGRWPEHMARMKQFWTAIAFKNGSYGGKPVQAHLGVQGMSAELFP
QWLALFSVTLDDIAPSRKAHDWFMETAERIARSLTLSLFYNPAMDDPAVKRSRS

Specific function: Unknown

COG id: COG2346

COG function: function code R; Truncated hemoglobins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15188; Mature: 15056

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEIGVDAAFIDLLVETFYGRVLEHQTLGPVFDARLAGRWPEHMARMKQFWTAIAFKNGS
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC
YGGKPVQAHLGVQGMSAELFPQWLALFSVTLDDIAPSRKAHDWFMETAERIARSLTLSLF
CCCCCEEHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
YNPAMDDPAVKRSRS
CCCCCCCHHHHCCCC
>Mature Secondary Structure 
AEIGVDAAFIDLLVETFYGRVLEHQTLGPVFDARLAGRWPEHMARMKQFWTAIAFKNGS
CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC
YGGKPVQAHLGVQGMSAELFPQWLALFSVTLDDIAPSRKAHDWFMETAERIARSLTLSLF
CCCCCEEHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
YNPAMDDPAVKRSRS
CCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA