Definition Dinoroseobacter shibae DFL 12 plasmid pDSHI03, complete sequence.
Accession NC_009957
Length 126,304

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The map label for this gene is zitB [C]

Identifier: 159046507

GI number: 159046507

Start: 30885

End: 31736

Strand: Direct

Name: zitB [C]

Synonym: Dshi_3968

Alternate gene names: 159046507

Gene position: 30885-31736 (Clockwise)

Preceding gene: 159046505

Following gene: 159046511

Centisome position: 24.45

GC content: 64.2

Gene sequence:

>852_bases
ATGAGCCAGCCCGATAACAGCAAGTTGGCGACAGCCTCCTCCCCGATCCGAATGCGGGTGCAAGGCATGGACTGCGCGAA
AGATGCCGCCGAGATCGAGCGCGCGGCCCGGTCTGCGGGCGTGGCCGAAGGCGACGTGAAAGTGTCCGCCGCCACCCACA
TCATGACATTGCGGATCGCGGACGGCGATCTGCCGAAAGTGCGGCCCGCGCTCGACGCGACCGGCTACGGTTTCGAGAAG
ATCGAGGACGGCGATACATCGTCCGATCCGGCCTACAAGGACCCGAGCTATCGCCGCGCGCTCTGGATCGTGGTCGCGCT
CAATCTCGGATACGGCGTGGTCGAAATGTTCGGCGGGTTCCTGTCCGGTTCGCAGGCGCTGAAGGCAGACGCGCTCGATT
TTCTGGGCGATGGTGCGATCACGTTTCTGGGCCTGCTCGCCATCGGCTGGAGCCTGACATGGCGGGCGCGGTCGGCGATG
ATCCAAGGCGTGTTTCTGGGCCTTCTGGGCCTTGGCGTTGTCGGCAGCACGCTCTGGCGTGTCCTCAACCAGACCACGCC
AGAAGCCGGGTTGATGGGAGCCTTCGCGGTAGGTGCGCTGATCGTAAACATCCTCGCGGTGCTGCCGCTGCTAAAGCACC
GCAAGGGTGATGCCAATATGCGAGCCGTCTGGCTGTTCTCTCGCAACGACGCCATCGGCAACCTCGCCGTGGTCATCGCC
GCCGGGCTGGTCGCGTGGCTTGGCAGTGCATGGCCCGACCTGATCGTCGCGTTCGCGATCGCGGGGCTTTTCCTGCATTC
GTCGTGGATGATCATCCGCGATGCCCGGAGTGACTTGGTGGAAGCTGACTAA

Upstream 100 bases:

>100_bases
GTGCCGAAAGATCGTCTTGAATGTTTTGCGCTGTCATATCATTATCCACTGATACGTTAGCAGCGTACCTTTTCGCCCGC
CACCACAAAAAGGATCGCAC

Downstream 100 bases:

>100_bases
CTCCATCATGGTGCGACGCGCCGAACGAAAGCCGACATTCGCGCGCCCCGCAGCATCGGTGAGTCTGGGCTCAGAGTCCG
CATTCGCCGCGTGCGGCCCC

Product: cation efflux protein

Products: NA

Alternate protein names: Co/Zn/Cd Efflux System Component; Cation Efflux Family Protein; Cation Efflux System Protein; Integral Membrane Protein; Co/Zn/Cd Efflux System Membrane Component; Cation Efflux Permease; Cation Efflux System Permease; Cation Diffusion Facilitator Family Transporter; Cation Diffusion Facilitator; Heavy Metal Detoxification Protein; Transmembrane Protein; Cobalt-Zinc-Cadmium Resistance Protein; Cation Efflux Protein ; CDF Family Heavy Metal/H(+) Antiporter; Co/Zn/Cd Efflux Protein; RND OM Export Protein; RND Efflux System Protein; Co/Zn/Cd Efflux System Protein; Zinc Transporter; CDF Family Cobalt/Cadmium/Zinc Transporter

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MSQPDNSKLATASSPIRMRVQGMDCAKDAAEIERAARSAGVAEGDVKVSAATHIMTLRIADGDLPKVRPALDATGYGFEK
IEDGDTSSDPAYKDPSYRRALWIVVALNLGYGVVEMFGGFLSGSQALKADALDFLGDGAITFLGLLAIGWSLTWRARSAM
IQGVFLGLLGLGVVGSTLWRVLNQTTPEAGLMGAFAVGALIVNILAVLPLLKHRKGDANMRAVWLFSRNDAIGNLAVVIA
AGLVAWLGSAWPDLIVAFAIAGLFLHSSWMIIRDARSDLVEAD

Sequences:

>Translated_283_residues
MSQPDNSKLATASSPIRMRVQGMDCAKDAAEIERAARSAGVAEGDVKVSAATHIMTLRIADGDLPKVRPALDATGYGFEK
IEDGDTSSDPAYKDPSYRRALWIVVALNLGYGVVEMFGGFLSGSQALKADALDFLGDGAITFLGLLAIGWSLTWRARSAM
IQGVFLGLLGLGVVGSTLWRVLNQTTPEAGLMGAFAVGALIVNILAVLPLLKHRKGDANMRAVWLFSRNDAIGNLAVVIA
AGLVAWLGSAWPDLIVAFAIAGLFLHSSWMIIRDARSDLVEAD
>Mature_282_residues
SQPDNSKLATASSPIRMRVQGMDCAKDAAEIERAARSAGVAEGDVKVSAATHIMTLRIADGDLPKVRPALDATGYGFEKI
EDGDTSSDPAYKDPSYRRALWIVVALNLGYGVVEMFGGFLSGSQALKADALDFLGDGAITFLGLLAIGWSLTWRARSAMI
QGVFLGLLGLGVVGSTLWRVLNQTTPEAGLMGAFAVGALIVNILAVLPLLKHRKGDANMRAVWLFSRNDAIGNLAVVIAA
GLVAWLGSAWPDLIVAFAIAGLFLHSSWMIIRDARSDLVEAD

Specific function: Involved In Zinc Efflux Across The Cytoplasmic Membrane, Thus Reducing Zinc Accumulation In The Cytoplasm And Rendering Bacteria More Resistant To Zinc. It May Contribute To Zinc Homeostasis At Low Concentrations Of Zinc, Whereas Znta Is Required For Grow

COG id: COG1230

COG function: function code P; Co/Zn/Cd efflux system component

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29999; Mature: 29868

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: PS50846 HMA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQPDNSKLATASSPIRMRVQGMDCAKDAAEIERAARSAGVAEGDVKVSAATHIMTLRIA
CCCCCCCCEEECCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEC
DGDLPKVRPALDATGYGFEKIEDGDTSSDPAYKDPSYRRALWIVVALNLGYGVVEMFGGF
CCCCCCCCHHHCCCCCCCHHCCCCCCCCCCCCCCCCHHHHEEEEEEHHCCHHHHHHHHHH
LSGSQALKADALDFLGDGAITFLGLLAIGWSLTWRARSAMIQGVFLGLLGLGVVGSTLWR
HCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLNQTTPEAGLMGAFAVGALIVNILAVLPLLKHRKGDANMRAVWLFSRNDAIGNLAVVIA
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHH
AGLVAWLGSAWPDLIVAFAIAGLFLHSSWMIIRDARSDLVEAD
HHHHHHHHCCHHHHHHHHHHHHHHHHCCHHEEECCHHHHCCCC
>Mature Secondary Structure 
SQPDNSKLATASSPIRMRVQGMDCAKDAAEIERAARSAGVAEGDVKVSAATHIMTLRIA
CCCCCCCEEECCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEC
DGDLPKVRPALDATGYGFEKIEDGDTSSDPAYKDPSYRRALWIVVALNLGYGVVEMFGGF
CCCCCCCCHHHCCCCCCCHHCCCCCCCCCCCCCCCCHHHHEEEEEEHHCCHHHHHHHHHH
LSGSQALKADALDFLGDGAITFLGLLAIGWSLTWRARSAMIQGVFLGLLGLGVVGSTLWR
HCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLNQTTPEAGLMGAFAVGALIVNILAVLPLLKHRKGDANMRAVWLFSRNDAIGNLAVVIA
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHH
AGLVAWLGSAWPDLIVAFAIAGLFLHSSWMIIRDARSDLVEAD
HHHHHHHHCCHHHHHHHHHHHHHHHHCCHHEEECCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA