| Definition | Dinoroseobacter shibae DFL 12 plasmid pDSHI03, complete sequence. |
|---|---|
| Accession | NC_009957 |
| Length | 126,304 |
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The map label for this gene is 159046504
Identifier: 159046504
GI number: 159046504
Start: 28872
End: 29183
Strand: Direct
Name: 159046504
Synonym: Dshi_3965
Alternate gene names: NA
Gene position: 28872-29183 (Clockwise)
Preceding gene: 159046503
Following gene: 159046505
Centisome position: 22.86
GC content: 59.29
Gene sequence:
>312_bases ATGTTCACCGAGACACTGACAGCTCATGACGACACGATTGGCCTCGCCTGCGAGGGCAAGCTCAGCGAAAGCGACCTGAA ACGGATGCACGCCCTGCTTCATGAGCGCCTGCAAGAGACAAGTAAGCCCGGCCTGGTTCTCGATCTCACGAGGTTCGAAG GCTACGATGGGCCGTCCGCTCTGCTCGAAGTTCTGAAAATCGACACAGCCCATAGGAATGACTTCCGCCGCGTCGCTGTG GTGGGCGAAGGGGCTTTGTTGGAGTGGGGAACCAGGTTCGCCGACGTGCTGACCACGGCAGAACTCCGTTAG
Upstream 100 bases:
>100_bases AGCATCGGTCATTCGAGTCTGGAATTTGAGCACGAAGACCGCGCACACGAAAACGCTGACCTTTACGGTCACGGCAAACC GGAAAAAGAGGAGGAAAACC
Downstream 100 bases:
>100_bases TTCGACCCGGCGGAAATGAAGGCGGCAATCGCCTGGGCAAGTGAAAGGTAGAGTAGCTTTCAATCAGATGCCTTCGCAGA AGACAGCATCTGTTCGAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 103; Mature: 103
Protein sequence:
>103_residues MFTETLTAHDDTIGLACEGKLSESDLKRMHALLHERLQETSKPGLVLDLTRFEGYDGPSALLEVLKIDTAHRNDFRRVAV VGEGALLEWGTRFADVLTTAELR
Sequences:
>Translated_103_residues MFTETLTAHDDTIGLACEGKLSESDLKRMHALLHERLQETSKPGLVLDLTRFEGYDGPSALLEVLKIDTAHRNDFRRVAV VGEGALLEWGTRFADVLTTAELR >Mature_103_residues MFTETLTAHDDTIGLACEGKLSESDLKRMHALLHERLQETSKPGLVLDLTRFEGYDGPSALLEVLKIDTAHRNDFRRVAV VGEGALLEWGTRFADVLTTAELR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11481; Mature: 11481
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTETLTAHDDTIGLACEGKLSESDLKRMHALLHERLQETSKPGLVLDLTRFEGYDGPSA CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHH LLEVLKIDTAHRNDFRRVAVVGEGALLEWGTRFADVLTTAELR HHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFTETLTAHDDTIGLACEGKLSESDLKRMHALLHERLQETSKPGLVLDLTRFEGYDGPSA CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHH LLEVLKIDTAHRNDFRRVAVVGEGALLEWGTRFADVLTTAELR HHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA