Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

Click here to switch to the map view.

The map label for this gene is 15889643

Identifier: 15889643

GI number: 15889643

Start: 2343365

End: 2344450

Strand: Reverse

Name: 15889643

Synonym: Atu2370

Alternate gene names: NA

Gene position: 2344450-2343365 (Counterclockwise)

Preceding gene: 159185177

Following gene: 15889640

Centisome position: 82.51

GC content: 59.85

Gene sequence:

>1086_bases
ATGACTATGAATGCTGAAATGCCGCTTCCTCCCGTACAAAAGGCGCTGCAAATCAACCTCCATCCTTTCGATGCTCCGCA
TGCGGCCCTTACCCTGCCGCATCAGCTGCGGGTCTGGGGCGGGCAGGTGGACCGTATTCTCCTGACGGTCGATACGGGGC
AGGTGGGGGCCGGCCGGTACAAGGGCAACGGTTTCGATTCAGCGCGCCAGCGTCTTTTCGACATGCTGGATGAAATGCAG
ATCAACTATCCGCATCTCTATGTGGATATCGTCGATTACAGCGATGCGGCGCGCAGCGCGGTGACGCAGACTTTCTTTTC
ACGCTCGCCGATTCCCTATCCCGCCAAGGCTTTCGACGGCGGGCCGTTCCATGTCTATTTTTACGGGCTGAAACGCGCCA
ATGCCCGATATGTGCTGCATATGGACAGCGACATGATGTTCGGCGGCGGCAGCCCGAGCTGGTTCAGCGAGGCGGTTGCG
CTGCAGAAGGCCAATCCGGATGCGCTGTGCATCACGCCCTTTTCCGGTCCGCCGACAGTGCGCGGCGATCTCGATATTTC
CCGTCATGTCGGCATGCCCGGGGTGAAGAATATCCCTGCGCCGCGCAAGCTGCCGTCGCGCATCCCCACCTGGCGTTTCG
CCACCGTTTCCACGCGGCTTTTCATGATCGACATGGAGCGTTTCGCCAAGCGGATCGGCTCGCTGGAATTGCTGCGGCCG
GATGTCAAGCGGCGCATCCGCTCTCTTGCCTATAACCAGCAGCCGGTCTCCATGCCCGCCGAGGAAGTGCTGAGCACTAA
CATGATGCGCAGCGGCGTCCACCGGCTCGATTTTCTCGGCACGGGCACGGGCATGTATTCGCTGCATCCGCCCTATCGTT
CACCGGAATTCTACGCGGCGCTCGCTTCGATCGTCGAGCGTATCGAAAAGGGCAATATTCCCGAAGGTCAGCTCGGCGAT
TTCGATATCAACGGATCGATGGTGGACTGGGGAAGCGCGCTCGCGGCCAAGACGCGTTCCAAACGCTATGCGAAAGCATT
GCGCCATCTCATCGCTGCCAATGTCGGGCGTTTTACCAAGGCTTGA

Upstream 100 bases:

>100_bases
CACGCCGGGACGGCACCGCCAACCGGCCGCTGCCGCTCGACTGGAGTTTCAACGAAAAACCCATGATGGCCGTCATCAAT
GAATTCCGGAACCGTGGTGC

Downstream 100 bases:

>100_bases
GGACGTCGCGCCTGTTCCGGTGCGGCGTCGGGCAGTGACCTTAATAGTCGGTGATGAGCTTGCTCCAGCTTTCCGAGCAC
AACCCGCCAATATAGATATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 361; Mature: 360

Protein sequence:

>361_residues
MTMNAEMPLPPVQKALQINLHPFDAPHAALTLPHQLRVWGGQVDRILLTVDTGQVGAGRYKGNGFDSARQRLFDMLDEMQ
INYPHLYVDIVDYSDAARSAVTQTFFSRSPIPYPAKAFDGGPFHVYFYGLKRANARYVLHMDSDMMFGGGSPSWFSEAVA
LQKANPDALCITPFSGPPTVRGDLDISRHVGMPGVKNIPAPRKLPSRIPTWRFATVSTRLFMIDMERFAKRIGSLELLRP
DVKRRIRSLAYNQQPVSMPAEEVLSTNMMRSGVHRLDFLGTGTGMYSLHPPYRSPEFYAALASIVERIEKGNIPEGQLGD
FDINGSMVDWGSALAAKTRSKRYAKALRHLIAANVGRFTKA

Sequences:

>Translated_361_residues
MTMNAEMPLPPVQKALQINLHPFDAPHAALTLPHQLRVWGGQVDRILLTVDTGQVGAGRYKGNGFDSARQRLFDMLDEMQ
INYPHLYVDIVDYSDAARSAVTQTFFSRSPIPYPAKAFDGGPFHVYFYGLKRANARYVLHMDSDMMFGGGSPSWFSEAVA
LQKANPDALCITPFSGPPTVRGDLDISRHVGMPGVKNIPAPRKLPSRIPTWRFATVSTRLFMIDMERFAKRIGSLELLRP
DVKRRIRSLAYNQQPVSMPAEEVLSTNMMRSGVHRLDFLGTGTGMYSLHPPYRSPEFYAALASIVERIEKGNIPEGQLGD
FDINGSMVDWGSALAAKTRSKRYAKALRHLIAANVGRFTKA
>Mature_360_residues
TMNAEMPLPPVQKALQINLHPFDAPHAALTLPHQLRVWGGQVDRILLTVDTGQVGAGRYKGNGFDSARQRLFDMLDEMQI
NYPHLYVDIVDYSDAARSAVTQTFFSRSPIPYPAKAFDGGPFHVYFYGLKRANARYVLHMDSDMMFGGGSPSWFSEAVAL
QKANPDALCITPFSGPPTVRGDLDISRHVGMPGVKNIPAPRKLPSRIPTWRFATVSTRLFMIDMERFAKRIGSLELLRPD
VKRRIRSLAYNQQPVSMPAEEVLSTNMMRSGVHRLDFLGTGTGMYSLHPPYRSPEFYAALASIVERIEKGNIPEGQLGDF
DINGSMVDWGSALAAKTRSKRYAKALRHLIAANVGRFTKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40229; Mature: 40098

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMNAEMPLPPVQKALQINLHPFDAPHAALTLPHQLRVWGGQVDRILLTVDTGQVGAGRY
CCCCCCCCCCHHHHHHEEECCCCCCCCCEEECCHHEEECCCCEEEEEEEEECCCCCCCCC
KGNGFDSARQRLFDMLDEMQINYPHLYVDIVDYSDAARSAVTQTFFSRSPIPYPAKAFDG
CCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCHHHCCC
GPFHVYFYGLKRANARYVLHMDSDMMFGGGSPSWFSEAVALQKANPDALCITPFSGPPTV
CCEEEEEEEEECCCCEEEEEECCCEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCC
RGDLDISRHVGMPGVKNIPAPRKLPSRIPTWRFATVSTRLFMIDMERFAKRIGSLELLRP
CCCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEHEEEEEEEEHHHHHHHHCCCHHCCH
DVKRRIRSLAYNQQPVSMPAEEVLSTNMMRSGVHRLDFLGTGTGMYSLHPPYRSPEFYAA
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCEEECCCCCCHHHHHH
LASIVERIEKGNIPEGQLGDFDINGSMVDWGSALAAKTRSKRYAKALRHLIAANVGRFTK
HHHHHHHHHHCCCCCCCCCCEECCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCC
A
C
>Mature Secondary Structure 
TMNAEMPLPPVQKALQINLHPFDAPHAALTLPHQLRVWGGQVDRILLTVDTGQVGAGRY
CCCCCCCCCHHHHHHEEECCCCCCCCCEEECCHHEEECCCCEEEEEEEEECCCCCCCCC
KGNGFDSARQRLFDMLDEMQINYPHLYVDIVDYSDAARSAVTQTFFSRSPIPYPAKAFDG
CCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCHHHCCC
GPFHVYFYGLKRANARYVLHMDSDMMFGGGSPSWFSEAVALQKANPDALCITPFSGPPTV
CCEEEEEEEEECCCCEEEEEECCCEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCC
RGDLDISRHVGMPGVKNIPAPRKLPSRIPTWRFATVSTRLFMIDMERFAKRIGSLELLRP
CCCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEHEEEEEEEEHHHHHHHHCCCHHCCH
DVKRRIRSLAYNQQPVSMPAEEVLSTNMMRSGVHRLDFLGTGTGMYSLHPPYRSPEFYAA
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCEEECCCCCCHHHHHH
LASIVERIEKGNIPEGQLGDFDINGSMVDWGSALAAKTRSKRYAKALRHLIAANVGRFTK
HHHHHHHHHHCCCCCCCCCCEECCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA