Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is hisQ [H]
Identifier: 15889638
GI number: 15889638
Start: 2339151
End: 2339873
Strand: Reverse
Name: hisQ [H]
Synonym: Atu2364
Alternate gene names: 15889638
Gene position: 2339873-2339151 (Counterclockwise)
Preceding gene: 15889639
Following gene: 15889637
Centisome position: 82.34
GC content: 64.04
Gene sequence:
>723_bases ATGGCAAGCCTTGAAACCACGCTGCAACTGCTGTCACCCTATCCTCCGGGATGGGGCGGCACCCTTTTGAAGGGTGCGGC GTCGACGCTTGCCATTTCCGCCGGTGCCTATCTGATTGGTATCGTTATCGGGCTTGCCGGCGCGCTCGGCAAGCTTTCCG GCAACAGGCCGCTTGGCCTGTTGCTCAATCTCTACACGACGGCGATCCGCGCGGTTCCCGAACTGATCCTCATCGTCGGG CTTTATTATGCCGGCACCGACGGTTTGAACCGGCTGCTGCAACTGATGGGCCTGCCGCCGCTTGAGGTGAACGGGTTCGT TGCCGCCGTCGCGGTTCTGGGGTTCGTGCAGGGCGCCTATATGACCGAGGTGCTGCGCGGCGCGATCCTTGCCGTGCCGA ACGGCCAGATCGAGGCGGCGCGGGCCTTCGGCATGTCGCCGTTCCTGCGTTTCCGCCGTGTGGTCCTACCAGCCCTGCTG CCGAATGCGCTGCCGGGCCTTGCCAATCTCTGGCTTGCGGTGACCAAGGACAGCGCGCTGGTGGCCGTGGTCGGTTATCA GGAACTGGCGCTGGCGACACGGCTGGCGGGGGCCAGCACCAAGCAATATTTCCTGTTCTTCCTTGCGGCGGCGTTTCTTT ATCTCGCGATCACGCTCGTCTCCAACCTCGTCTTTTCACAGCTGGAACGCCGGGTGCGGCGCGGCCAGCCGGCTTTGGCC TGA
Upstream 100 bases:
>100_bases ATCGCTGCCGTGCGCGCCAGCGGGAAGTATGACGAGATCACCAAGAAATACTTCAGCTTCGATATCTACGGTAACTAATT TCTCCTGACCGGTCACATCA
Downstream 100 bases:
>100_bases GGGGGAACGGCATGGATTTTTCATGGGTCGCCAAATATTGGCCGCTGCTTCTGTCCGGCGCCTGGCAGACGCTGGCGCTG CTCGTCATCTCCGTCAGCAT
Product: ABC transporter, membrane spanning protein
Products: ADP; phosphate; L-histidine [Cytoplasm]; ADP; L-ornithine [Cytoplasm]; L-arginine [Cytoplasm]; L-lysine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MASLETTLQLLSPYPPGWGGTLLKGAASTLAISAGAYLIGIVIGLAGALGKLSGNRPLGLLLNLYTTAIRAVPELILIVG LYYAGTDGLNRLLQLMGLPPLEVNGFVAAVAVLGFVQGAYMTEVLRGAILAVPNGQIEAARAFGMSPFLRFRRVVLPALL PNALPGLANLWLAVTKDSALVAVVGYQELALATRLAGASTKQYFLFFLAAAFLYLAITLVSNLVFSQLERRVRRGQPALA
Sequences:
>Translated_240_residues MASLETTLQLLSPYPPGWGGTLLKGAASTLAISAGAYLIGIVIGLAGALGKLSGNRPLGLLLNLYTTAIRAVPELILIVG LYYAGTDGLNRLLQLMGLPPLEVNGFVAAVAVLGFVQGAYMTEVLRGAILAVPNGQIEAARAFGMSPFLRFRRVVLPALL PNALPGLANLWLAVTKDSALVAVVGYQELALATRLAGASTKQYFLFFLAAAFLYLAITLVSNLVFSQLERRVRRGQPALA >Mature_239_residues ASLETTLQLLSPYPPGWGGTLLKGAASTLAISAGAYLIGIVIGLAGALGKLSGNRPLGLLLNLYTTAIRAVPELILIVGL YYAGTDGLNRLLQLMGLPPLEVNGFVAAVAVLGFVQGAYMTEVLRGAILAVPNGQIEAARAFGMSPFLRFRRVVLPALLP NALPGLANLWLAVTKDSALVAVVGYQELALATRLAGASTKQYFLFFLAAAFLYLAITLVSNLVFSQLERRVRRGQPALA
Specific function: Part of the binding-protein-dependent transport system for histidine; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4215
COG function: function code E; ABC-type arginine transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788646, Length=219, Percent_Identity=42.9223744292237, Blast_Score=175, Evalue=2e-45, Organism=Escherichia coli, GI1787087, Length=226, Percent_Identity=30.0884955752212, Blast_Score=114, Evalue=4e-27, Organism=Escherichia coli, GI1788226, Length=217, Percent_Identity=31.3364055299539, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI1787030, Length=216, Percent_Identity=32.4074074074074, Blast_Score=95, Evalue=5e-21, Organism=Escherichia coli, GI1788645, Length=235, Percent_Identity=32.7659574468085, Blast_Score=91, Evalue=7e-20, Organism=Escherichia coli, GI1786873, Length=210, Percent_Identity=27.6190476190476, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1786874, Length=217, Percent_Identity=27.1889400921659, Blast_Score=62, Evalue=4e-11, Organism=Escherichia coli, GI87082239, Length=226, Percent_Identity=28.7610619469027, Blast_Score=62, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 25249; Mature: 25118
Theoretical pI: Translated: 10.37; Mature: 10.37
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASLETTLQLLSPYPPGWGGTLLKGAASTLAISAGAYLIGIVIGLAGALGKLSGNRPLGL CCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH LLNLYTTAIRAVPELILIVGLYYAGTDGLNRLLQLMGLPPLEVNGFVAAVAVLGFVQGAY HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH MTEVLRGAILAVPNGQIEAARAFGMSPFLRFRRVVLPALLPNALPGLANLWLAVTKDSAL HHHHHHHHEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHEECCCEE VAVVGYQELALATRLAGASTKQYFLFFLAAAFLYLAITLVSNLVFSQLERRVRRGQPALA EEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure ASLETTLQLLSPYPPGWGGTLLKGAASTLAISAGAYLIGIVIGLAGALGKLSGNRPLGL CCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH LLNLYTTAIRAVPELILIVGLYYAGTDGLNRLLQLMGLPPLEVNGFVAAVAVLGFVQGAY HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH MTEVLRGAILAVPNGQIEAARAFGMSPFLRFRRVVLPALLPNALPGLANLWLAVTKDSAL HHHHHHHHEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHEECCCEE VAVVGYQELALATRLAGASTKQYFLFFLAAAFLYLAITLVSNLVFSQLERRVRRGQPALA EEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-histidine [Periplasm]; H2O; ATP; L-ornithine [Periplasm]; L-arginine [Periplasm]; L-lysine [Periplasm] [C]
Specific reaction: ATP + L-histidine [Periplasm] + H2O = ADP + phosphate + L-histidine [Cytoplasm] ATP + L-ornithine [Periplasm] + H2O = ADP + phosphate + L-ornithine [Cytoplasm] ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] ATP + L-lysine [P
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]