Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is hisJ [H]
Identifier: 15889639
GI number: 15889639
Start: 2339896
End: 2340666
Strand: Reverse
Name: hisJ [H]
Synonym: Atu2365
Alternate gene names: 15889639
Gene position: 2340666-2339896 (Counterclockwise)
Preceding gene: 15889640
Following gene: 15889638
Centisome position: 82.37
GC content: 56.03
Gene sequence:
>771_bases ATGAAATTCTTCGCCACGCTGCTTGCCGGAACGGCATTTGCGGTTTCCGCCTTCACCGCCAGCGCCGATGTCCGCTTCGG CATCATGAACGAATCCTACCCGCCCTTCTTTGCCAAGGATGCCAGCGGCAAGTGGCAGGGCTGGGAAATCGATCTCATGG ACGCCGTCTGCGCGGAAATGAAAGAAAAGTGCTCGATCGTCGAGCTTTCCTGGGATGGCCTCATCCCGGCGCTGCAAACG AAGAAGTTCGATGTCATCTGGTCGTCCATGTCCAACACGCAGGAGCGCGAGAAGGTCATCGATTTCACCAACAAATATTA CAACACGCCAAGCAAGCTGATCGGCGCCAAGGGTGAAAAGCCGGGTGCGGCACCGGAAGACGTCAAGGGCAAGACCATCG GCATTCAGGTCGCGACCATCCAGTCCGAATATTACAAGAAATATTTCGCCGCTGTTGCTGACGAAAAGACCTACCAGACG CTGGACGAGGCGTTTCAGGATCTGGCCGCCGGCCGTATCGATTATGTCTTCGGCGACTCGCTCGTTCTCGATGCCTTCGT CAAGAGCGATGCCGGCAAGGATTGCTGCGCCGACATGGGCAATGTGGCGGACGACAAGGAAATCATGGGTCTTGGCGTTT CCGGCGGCCTGCGCAAGGACGACACCGAACTCAAGAACAAGCTGAATGCTGCTATCGCTGCCGTGCGCGCCAGCGGGAAG TATGACGAGATCACCAAGAAATACTTCAGCTTCGATATCTACGGTAACTAA
Upstream 100 bases:
>100_bases TGTTCGGCAATCCGTTGAGCGCCCGTTGCAGGGAATTTACCGGCGCGCTGGCGTAATGGCCGTTTCGCTTCGCCGTTTGT TTTAACAGGAGAGACTTAAA
Downstream 100 bases:
>100_bases TTTCTCCTGACCGGTCACATCAATGGCAAGCCTTGAAACCACGCTGCAACTGCTGTCACCCTATCCTCCGGGATGGGGCG GCACCCTTTTGAAGGGTGCG
Product: ABC transporter, substrate binding protein (amino acid)
Products: ADP; phosphate; L-histidine [Cytoplasm] [C]
Alternate protein names: HBP [H]
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MKFFATLLAGTAFAVSAFTASADVRFGIMNESYPPFFAKDASGKWQGWEIDLMDAVCAEMKEKCSIVELSWDGLIPALQT KKFDVIWSSMSNTQEREKVIDFTNKYYNTPSKLIGAKGEKPGAAPEDVKGKTIGIQVATIQSEYYKKYFAAVADEKTYQT LDEAFQDLAAGRIDYVFGDSLVLDAFVKSDAGKDCCADMGNVADDKEIMGLGVSGGLRKDDTELKNKLNAAIAAVRASGK YDEITKKYFSFDIYGN
Sequences:
>Translated_256_residues MKFFATLLAGTAFAVSAFTASADVRFGIMNESYPPFFAKDASGKWQGWEIDLMDAVCAEMKEKCSIVELSWDGLIPALQT KKFDVIWSSMSNTQEREKVIDFTNKYYNTPSKLIGAKGEKPGAAPEDVKGKTIGIQVATIQSEYYKKYFAAVADEKTYQT LDEAFQDLAAGRIDYVFGDSLVLDAFVKSDAGKDCCADMGNVADDKEIMGLGVSGGLRKDDTELKNKLNAAIAAVRASGK YDEITKKYFSFDIYGN >Mature_256_residues MKFFATLLAGTAFAVSAFTASADVRFGIMNESYPPFFAKDASGKWQGWEIDLMDAVCAEMKEKCSIVELSWDGLIPALQT KKFDVIWSSMSNTQEREKVIDFTNKYYNTPSKLIGAKGEKPGAAPEDVKGKTIGIQVATIQSEYYKKYFAAVADEKTYQT LDEAFQDLAAGRIDYVFGDSLVLDAFVKSDAGKDCCADMGNVADDKEIMGLGVSGGLRKDDTELKNKLNAAIAAVRASGK YDEITKKYFSFDIYGN
Specific function: Component of the high-affinity histidine permease, a binding-protein-dependent transport system. The other components are proteins hisQ, hisM, and hisP [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788648, Length=235, Percent_Identity=39.1489361702128, Blast_Score=164, Evalue=4e-42, Organism=Escherichia coli, GI1788649, Length=254, Percent_Identity=38.9763779527559, Blast_Score=164, Evalue=6e-42, Organism=Escherichia coli, GI1787085, Length=246, Percent_Identity=33.739837398374, Blast_Score=138, Evalue=4e-34, Organism=Escherichia coli, GI1787088, Length=248, Percent_Identity=33.0645161290323, Blast_Score=136, Evalue=1e-33, Organism=Escherichia coli, GI1787031, Length=239, Percent_Identity=29.2887029288703, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI1788228, Length=224, Percent_Identity=29.4642857142857, Blast_Score=95, Evalue=4e-21,
Paralogues:
None
Copy number: 3400 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 320 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 6,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 28120; Mature: 28120
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFFATLLAGTAFAVSAFTASADVRFGIMNESYPPFFAKDASGKWQGWEIDLMDAVCAEM CHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEECCCCCCCCCEEEHHHHHHHHHH KEKCSIVELSWDGLIPALQTKKFDVIWSSMSNTQEREKVIDFTNKYYNTPSKLIGAKGEK HHCCCEEEEECCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHCCCCCC PGAAPEDVKGKTIGIQVATIQSEYYKKYFAAVADEKTYQTLDEAFQDLAAGRIDYVFGDS CCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEECCH LVLDAFVKSDAGKDCCADMGNVADDKEIMGLGVSGGLRKDDTELKNKLNAAIAAVRASGK HHHHHHHHCCCCCHHHHHCCCCCCCCHHEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCC YDEITKKYFSFDIYGN HHHHHHHHHEEEECCC >Mature Secondary Structure MKFFATLLAGTAFAVSAFTASADVRFGIMNESYPPFFAKDASGKWQGWEIDLMDAVCAEM CHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEECCCCCCCCCEEEHHHHHHHHHH KEKCSIVELSWDGLIPALQTKKFDVIWSSMSNTQEREKVIDFTNKYYNTPSKLIGAKGEK HHCCCEEEEECCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHCCCCCC PGAAPEDVKGKTIGIQVATIQSEYYKKYFAAVADEKTYQTLDEAFQDLAAGRIDYVFGDS CCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEECCH LVLDAFVKSDAGKDCCADMGNVADDKEIMGLGVSGGLRKDDTELKNKLNAAIAAVRASGK HHHHHHHHCCCCCHHHHHCCCCCCCCHHEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCC YDEITKKYFSFDIYGN HHHHHHHHHEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-histidine [Periplasm]; H2O [C]
Specific reaction: ATP + L-histidine [Periplasm] + H2O = ADP + phosphate + L-histidine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]