Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15889315
Identifier: 15889315
GI number: 15889315
Start: 1988551
End: 1989033
Strand: Reverse
Name: 15889315
Synonym: Atu8169
Alternate gene names: NA
Gene position: 1989033-1988551 (Counterclockwise)
Preceding gene: 15889316
Following gene: 159185016
Centisome position: 70.0
GC content: 61.49
Gene sequence:
>483_bases ATGACCGAGACTTTCAATCCCGATCTCGACCTGAAGATTTCACGCATCATCAAGGCGCCGCGCCGGCTGGTCTGGAATGC CTGGACGGACAAGACCAGCCTGGAACAATGGTGGGTGCCGCATCCCGGCCAGTGCCGGGTGGACAAAATGGAGCTTCACC CCGGCGGTGCTTTCGAGACGCGCTACAGCGAAGACGGCAGGGAATTTGGCCAGCATGTCAGCGGCTGTTTCCTGGCGGTG GATCATGAGCAGCGCCTCATCTTCACCGATGCGCTGACGGCGGGTTTCCGGCCCTCCGCCCAGCCGTTCCTCACCGCCGT GATGACGTTTCGCGATCATCCTGATGGCATGGAATATGAGGCCTATGCCATGCACAACAACCTTGCCGACCGCGACAGGC ACGCGGAGATGGGGTTCTTCGACGGCTGGAACACGGTTGCGGAGCAGCTGGCGCAGCTTGTCGAGAAGCAGGCGGCGCAT TGA
Upstream 100 bases:
>100_bases TTTCGCAACAGCGTGCCGTCTGGGAGGGCCGCACCGACCGGCTCGAGCAATTCGTCATGGCGCAACAGGACAGGATGTCC AGCAAAGGGGAGAATGACCA
Downstream 100 bases:
>100_bases GGTCATCATTCTCATTGCGCGATTCATCTTTCGTTCTTTTTCTGTTGCGCATCAGGCTCGAATCCTGCGATGAGGACGCA TGTTATTTTCACCGCAACAG
Product: hypothetical protein
Products: NA
Alternate protein names: Response Regulator Receiver Domain-Containing Protein; Conserved Hypothethical Protein; Hsp90 ATPase Activator Family Protein
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MTETFNPDLDLKISRIIKAPRRLVWNAWTDKTSLEQWWVPHPGQCRVDKMELHPGGAFETRYSEDGREFGQHVSGCFLAV DHEQRLIFTDALTAGFRPSAQPFLTAVMTFRDHPDGMEYEAYAMHNNLADRDRHAEMGFFDGWNTVAEQLAQLVEKQAAH
Sequences:
>Translated_160_residues MTETFNPDLDLKISRIIKAPRRLVWNAWTDKTSLEQWWVPHPGQCRVDKMELHPGGAFETRYSEDGREFGQHVSGCFLAV DHEQRLIFTDALTAGFRPSAQPFLTAVMTFRDHPDGMEYEAYAMHNNLADRDRHAEMGFFDGWNTVAEQLAQLVEKQAAH >Mature_159_residues TETFNPDLDLKISRIIKAPRRLVWNAWTDKTSLEQWWVPHPGQCRVDKMELHPGGAFETRYSEDGREFGQHVSGCFLAVD HEQRLIFTDALTAGFRPSAQPFLTAVMTFRDHPDGMEYEAYAMHNNLADRDRHAEMGFFDGWNTVAEQLAQLVEKQAAH
Specific function: Unknown
COG id: COG3832
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18421; Mature: 18290
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTETFNPDLDLKISRIIKAPRRLVWNAWTDKTSLEQWWVPHPGQCRVDKMELHPGGAFET CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCEEEEEEECCCCCCCC RYSEDGREFGQHVSGCFLAVDHEQRLIFTDALTAGFRPSAQPFLTAVMTFRDHPDGMEYE CCCHHHHHHHHHHCCEEEEECCCCEEEEEHHHHCCCCCCCHHHHHHHHHHCCCCCCCCEE AYAMHNNLADRDRHAEMGFFDGWNTVAEQLAQLVEKQAAH HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TETFNPDLDLKISRIIKAPRRLVWNAWTDKTSLEQWWVPHPGQCRVDKMELHPGGAFET CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCEEEEEEECCCCCCCC RYSEDGREFGQHVSGCFLAVDHEQRLIFTDALTAGFRPSAQPFLTAVMTFRDHPDGMEYE CCCHHHHHHHHHHCCEEEEECCCCEEEEEHHHHCCCCCCCHHHHHHHHHHCCCCCCCCEE AYAMHNNLADRDRHAEMGFFDGWNTVAEQLAQLVEKQAAH HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA