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The map label for this gene is yrrC [H]

Identifier: 159185016

GI number: 159185016

Start: 1987344

End: 1988471

Strand: Reverse

Name: yrrC [H]

Synonym: Atu2026

Alternate gene names: 159185016

Gene position: 1988471-1987344 (Counterclockwise)

Preceding gene: 15889315

Following gene: 159185015

Centisome position: 69.98

GC content: 58.95

Gene sequence:

>1128_bases
ATGTTATTTTCACCGCAACAGGACGAAGCGCTCAAGGCTGTTTCCCGCTGGCTGAAAGAAGGCCGGACGCCGGTTTTCCG
GCTGTTCGGTTATGCCGGAACGGGCAAGACGACGCTTGCCAAGCATTTTGCGGAAAATGTCGATGGTGAGGTGCTGTTTG
CTGCCTTCACCGGCAAGGCGGCGCAGGTGCTGCGTTCGCGCGGGGCGACCAATGCCCGCACCATTCATTCGCTGATCTAC
CGCCCACGCGGTGAAGAAACGGTCGAAGACGAGGAAACCGGCAAAACCTCTGTTGCGCCGATGTTTTCCATCAACCGCCA
GAGCCCGCTCGCCAAGGCAGCGCTGATCATCATCGATGAATGCTCGATGGTGGACGAGCAGCTCGGCAAGGATCTGATGA
GTTTCGGCACACCGATCCTCGTGCTTGGTGATCCCGGCCAGCTGCCGCCGGTTTCGGGCGGCGGCTTTTTTACCGAGCAG
GAGCCGGATTTTCTGCTGTCGGAAATCCACCGCCAGGCCAAGGATAACCCCATCATCCATCTTGCCATGGATGTGCGCGA
AGGCCGCGAGATCATGCGCGGCGATTATGGCTCCGCGCAGGTGATTTCCAAGTCCGAAGTGACGCAGTCGCTGGTGCTCG
AGGCCGATCAGGTTCTGGTCGGCACCAATCGCACCCGCCGCCGCTACAATCAGCGGCTTCGTGAGCTGAAGGGTTTTTCC
GCCGATTATCCACAGTCCGGCGACAAGCTGGTCTGCCTTCGCAACGATCCGGCCAAGGGCCTGCTCAACGGCTCGCTGTG
GCAGGTGATGAGTTCATCGCGCGAGACGGTGAAACCCGGCATCAACCTGATGATCCGGCCGGAAGATGACGATATGGATC
GCGGTGCGGCCAAGATCAAATTGCTGAAGGCGGCCTTCGAGGATGTGGAGACCGAAATTCCCTGGTCGACCCGCAAGAGG
TACGACGAGTTCGATTTCGGTTACGCGCTGACCGTGCACAAGGCACAGGGTTCGCAATGGAACAATGTGGTTCTCTTCGA
CGAGAGCTATGCTTTCCGTGATTCTCGCGAAAGATGGCTTTACACTGCCATCACCCGCGCGGCCGAAACCCTGACGATCG
TTCGTTGA

Upstream 100 bases:

>100_bases
GAGAAGCAGGCGGCGCATTGAGGTCATCATTCTCATTGCGCGATTCATCTTTCGTTCTTTTTCTGTTGCGCATCAGGCTC
GAATCCTGCGATGAGGACGC

Downstream 100 bases:

>100_bases
TCAGGCACGGATGACGCCGAGCAGAACCGCCTTGGCGACCGCCTGAAAGCGGTTGCTGGCACTGAACTTGCCGATGATCT
TTGCCTCCAGCGTGTTGAGA

Product: exodeoxyribonuclease V

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MLFSPQQDEALKAVSRWLKEGRTPVFRLFGYAGTGKTTLAKHFAENVDGEVLFAAFTGKAAQVLRSRGATNARTIHSLIY
RPRGEETVEDEETGKTSVAPMFSINRQSPLAKAALIIIDECSMVDEQLGKDLMSFGTPILVLGDPGQLPPVSGGGFFTEQ
EPDFLLSEIHRQAKDNPIIHLAMDVREGREIMRGDYGSAQVISKSEVTQSLVLEADQVLVGTNRTRRRYNQRLRELKGFS
ADYPQSGDKLVCLRNDPAKGLLNGSLWQVMSSSRETVKPGINLMIRPEDDDMDRGAAKIKLLKAAFEDVETEIPWSTRKR
YDEFDFGYALTVHKAQGSQWNNVVLFDESYAFRDSRERWLYTAITRAAETLTIVR

Sequences:

>Translated_375_residues
MLFSPQQDEALKAVSRWLKEGRTPVFRLFGYAGTGKTTLAKHFAENVDGEVLFAAFTGKAAQVLRSRGATNARTIHSLIY
RPRGEETVEDEETGKTSVAPMFSINRQSPLAKAALIIIDECSMVDEQLGKDLMSFGTPILVLGDPGQLPPVSGGGFFTEQ
EPDFLLSEIHRQAKDNPIIHLAMDVREGREIMRGDYGSAQVISKSEVTQSLVLEADQVLVGTNRTRRRYNQRLRELKGFS
ADYPQSGDKLVCLRNDPAKGLLNGSLWQVMSSSRETVKPGINLMIRPEDDDMDRGAAKIKLLKAAFEDVETEIPWSTRKR
YDEFDFGYALTVHKAQGSQWNNVVLFDESYAFRDSRERWLYTAITRAAETLTIVR
>Mature_375_residues
MLFSPQQDEALKAVSRWLKEGRTPVFRLFGYAGTGKTTLAKHFAENVDGEVLFAAFTGKAAQVLRSRGATNARTIHSLIY
RPRGEETVEDEETGKTSVAPMFSINRQSPLAKAALIIIDECSMVDEQLGKDLMSFGTPILVLGDPGQLPPVSGGGFFTEQ
EPDFLLSEIHRQAKDNPIIHLAMDVREGREIMRGDYGSAQVISKSEVTQSLVLEADQVLVGTNRTRRRYNQRLRELKGFS
ADYPQSGDKLVCLRNDPAKGLLNGSLWQVMSSSRETVKPGINLMIRPEDDDMDRGAAKIKLLKAAFEDVETEIPWSTRKR
YDEFDFGYALTVHKAQGSQWNNVVLFDESYAFRDSRERWLYTAITRAAETLTIVR

Specific function: Unknown

COG id: COG0507

COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR006345 [H]

Pfam domain/function: NA

EC number: 3.1.11.5

Molecular weight: Translated: 42030; Mature: 42030

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFSPQQDEALKAVSRWLKEGRTPVFRLFGYAGTGKTTLAKHFAENVDGEVLFAAFTGKA
CCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCHH
AQVLRSRGATNARTIHSLIYRPRGEETVEDEETGKTSVAPMFSINRQSPLAKAALIIIDE
HHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHCCCCCCCCEEECCCCCCHHHEEEEEEHH
CSMVDEQLGKDLMSFGTPILVLGDPGQLPPVSGGGFFTEQEPDFLLSEIHRQAKDNPIIH
HHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEE
LAMDVREGREIMRGDYGSAQVISKSEVTQSLVLEADQVLVGTNRTRRRYNQRLRELKGFS
EEEEHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHCCCC
ADYPQSGDKLVCLRNDPAKGLLNGSLWQVMSSSRETVKPGINLMIRPEDDDMDRGAAKIK
CCCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCHHHCCCCEEEEECCCCCCCCHHHHHH
LLKAAFEDVETEIPWSTRKRYDEFDFGYALTVHKAQGSQWNNVVLFDESYAFRDSRERWL
HHHHHHHHHHCCCCCHHHHCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCHHHHH
YTAITRAAETLTIVR
HHHHHHHHHHEEECC
>Mature Secondary Structure
MLFSPQQDEALKAVSRWLKEGRTPVFRLFGYAGTGKTTLAKHFAENVDGEVLFAAFTGKA
CCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCHH
AQVLRSRGATNARTIHSLIYRPRGEETVEDEETGKTSVAPMFSINRQSPLAKAALIIIDE
HHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHCCCCCCCCEEECCCCCCHHHEEEEEEHH
CSMVDEQLGKDLMSFGTPILVLGDPGQLPPVSGGGFFTEQEPDFLLSEIHRQAKDNPIIH
HHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEE
LAMDVREGREIMRGDYGSAQVISKSEVTQSLVLEADQVLVGTNRTRRRYNQRLRELKGFS
EEEEHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHCCCC
ADYPQSGDKLVCLRNDPAKGLLNGSLWQVMSSSRETVKPGINLMIRPEDDDMDRGAAKIK
CCCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCHHHCCCCEEEEECCCCCCCCHHHHHH
LLKAAFEDVETEIPWSTRKRYDEFDFGYALTVHKAQGSQWNNVVLFDESYAFRDSRERWL
HHHHHHHHHHCCCCCHHHHCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCHHHHH
YTAITRAAETLTIVR
HHHHHHHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]