Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15889316
Identifier: 15889316
GI number: 15889316
Start: 1989030
End: 1989404
Strand: Reverse
Name: 15889316
Synonym: Atu2028
Alternate gene names: NA
Gene position: 1989404-1989030 (Counterclockwise)
Preceding gene: 159185019
Following gene: 15889315
Centisome position: 70.01
GC content: 59.47
Gene sequence:
>375_bases ATGATAGTTAGCTTTATGGAAAACTATTCAGACGCGCTCAACGATATCTTCCAGTCTCTCGCCGATCCGACCCGCAGGGC CGTGATCCTGCGGCTGGGCGGCGGGGAGGCGAGCATTGGAACGCTGGCCGAACCCTTCGCTATGGCCCTGCCATCCTTCA TGAAACATATCCGCCAGCTGGAGGAGGCGGGGCTGATCGTGACACGCAAGCAGGGGCGTGTCCGGTTCTGCTCGCTGGAG AAACAGAGGTTTTCCATGCTCGATGGCTGGCTTTCGCAACAGCGTGCCGTCTGGGAGGGCCGCACCGACCGGCTCGAGCA ATTCGTCATGGCGCAACAGGACAGGATGTCCAGCAAAGGGGAGAATGACCAATGA
Upstream 100 bases:
>100_bases GGCTCAAGCCGCCAGCGCATCAAGAGACACCGTCGCGCGCCGGTTTATTCCCCGTTGCGAAATATTTTTTAAACTTATCC ATTGAGCTAAGTGTTTTCCC
Downstream 100 bases:
>100_bases CCGAGACTTTCAATCCCGATCTCGACCTGAAGATTTCACGCATCATCAAGGCGCCGCGCCGGCTGGTCTGGAATGCCTGG ACGGACAAGACCAGCCTGGA
Product: ArsR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator ArsR Family; Regulatory Protein ArsR; Transcriptional Regulator; Transcriptional Regulator ArsR Family Protein; Transcriptional Regulator Protein; ArsR Family Regulatory; Transcriptional Regulator TrmB; Transcription Regulator ArsR; Transcriptional Regulator Arsr Family; ArsR Family Transcriptional Regulatory Protein; Transcriptional Regulator Arsr Domain Protein; Arsenical Resistance Operon Repressor; Transcriptional Regulator Protein ArsR Family; Transcriptional Regulatory Protein; Transcriptional Regulatory ArsR Family; MarR Family Transcriptional Regulator; Arsr Family Transcriptional Regulator; Transcription Regulator; Transcriptional Regulatory Protein Asrr; Transcriptional Regulatory Protein ArsR Family; Transcriptional Regulator ArsR-Family; Xin-Antitoxin System Antitoxin Component ArsR Family; HTH Family Transcriptional Regulator
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MIVSFMENYSDALNDIFQSLADPTRRAVILRLGGGEASIGTLAEPFAMALPSFMKHIRQLEEAGLIVTRKQGRVRFCSLE KQRFSMLDGWLSQQRAVWEGRTDRLEQFVMAQQDRMSSKGENDQ
Sequences:
>Translated_124_residues MIVSFMENYSDALNDIFQSLADPTRRAVILRLGGGEASIGTLAEPFAMALPSFMKHIRQLEEAGLIVTRKQGRVRFCSLE KQRFSMLDGWLSQQRAVWEGRTDRLEQFVMAQQDRMSSKGENDQ >Mature_124_residues MIVSFMENYSDALNDIFQSLADPTRRAVILRLGGGEASIGTLAEPFAMALPSFMKHIRQLEEAGLIVTRKQGRVRFCSLE KQRFSMLDGWLSQQRAVWEGRTDRLEQFVMAQQDRMSSKGENDQ
Specific function: Unknown
COG id: COG0640
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14143; Mature: 14143
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVSFMENYSDALNDIFQSLADPTRRAVILRLGGGEASIGTLAEPFAMALPSFMKHIRQL CCHHHHHHHHHHHHHHHHHHHCHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH EEAGLIVTRKQGRVRFCSLEKQRFSMLDGWLSQQRAVWEGRTDRLEQFVMAQQDRMSSKG HHCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC ENDQ CCCC >Mature Secondary Structure MIVSFMENYSDALNDIFQSLADPTRRAVILRLGGGEASIGTLAEPFAMALPSFMKHIRQL CCHHHHHHHHHHHHHHHHHHHCHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH EEAGLIVTRKQGRVRFCSLEKQRFSMLDGWLSQQRAVWEGRTDRLEQFVMAQQDRMSSKG HHCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC ENDQ CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA