Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is glpK [H]
Identifier: 15889199
GI number: 15889199
Start: 1880193
End: 1881662
Strand: Direct
Name: glpK [H]
Synonym: Atu1903
Alternate gene names: 15889199
Gene position: 1880193-1881662 (Clockwise)
Preceding gene: 159184971
Following gene: 159184972
Centisome position: 66.17
GC content: 64.01
Gene sequence:
>1470_bases ATGCGCGCTATTCTGTCCATCGATCAGGGCACCACCAATTCCAAGGCCATACTCGTCTCGGAAAGCGGAGAGTTGCTCGC GCGCGGCTCATCGCCGGTCGGCATTACCTATCCGCAGCCCGGCTGGGTGGAACAGGACCCGAACCGTATCTGGGCCTCGG TCCGTGAAGCGATCTCCGCCTGCCTCGCAGCCGCACCCTCCGACGTCAGCGTCGAAGCCATCGCCATCTCAAACCAGCGC GAATCGGTCACAATCTGGGACGGTGAAACCGGCGAGCCGCTTGGCCCGGTGCTAAGCTGGCAATGCCGCCGCACCGCACA GGACTGCGCAGACCTGATCGCAAAGGGACAATCAGAACGCGTCATGGCCCTGACCGGCCTGCCGATCGACCCGATGTTTC CCGGCGCTAAGATGCGCTGGCTGCTGGAACGGGCGCCGAAAGGCCGCAAGCTTCGCCTCGGCACCATAGATAGCTGGCTC ATCCATTGCTTCACCGGCGGCAAGGTTCATGCCTGCGACGCCTCAAACGCAGCCCGCAGCCAGGTGCTCGATCTCAACCG GCAGGTCTGGAGCGACGAGCTCTGTGACCTCTTCGGCATCGATATCAATGCCCTGCCGGACCTGCGCGACAGCAGCGGCG ACTTCGGCGTGACATCAGGCGTTCCCGGCATCAAGGATGGCACGCCGATCCTCGCGGCCATCGGCGACAGCCACGCCGCC CTCTTCGGCCATGGCGCTTTCAACCCCGGAGACGGTAAAGTGACCTTCGGCACCGGCTCGTCGGTCATGACGACGCTGCC GCATTTCATCGCGCCTGAGCGCGGCATCACCACAACGGTTGCATGGCGGCTCGGCGGCAAACCGACCTTCGCCTTTGAAG GCAATATTCTCGTTTCGGCAGCCTCCCTGCCATGGATGACGGACATTCTCGGCCTGCCGGATGTCGCCGCGCTGGTGGAA CTCGCCGCCACGGCCGAACCGGAGGGGCCGGGGTTTGTGCCGGCCTTTGTCGGCCTTGGCGCGCCCTATTGGGATACCAA CGCGCGCGCGCTGTTTTCGCAAATCAATTTCAGCACCACCCGCGCCCAGATGGCCCGGGCGGTCACCGATTCCATCGCCT TTCAGGTCCACGACGTCTTCGCCGCCATGCGCGCGCAGTCGCCTTCCGGTTTCGGGCGCCTCTTCGTGGATGGCGGGCCG AGCCAGAACCGTTTCCTGATGCAATGCGTCGCCGATATGCTGGAACACCCCGTCATTCAGCGCGATGCGCCGGAAGCCTC CGCCCTCGGCGCTGCCTATCTCGCCGGCCTGGCCCTCGGTGTCTGGAGTGATCTTAATGCCATCGCAGCGTTGAATAGCA ACGGGAACACCATCGCGACTTCAACCGGTGAAAGCCGTCAGCGGCTCGGCATCTGGCGCGATGCGATTGCTCGCTCGACC TTGCCCGTAACCTCGGGTAATGGTGAATAA
Upstream 100 bases:
>100_bases CGCGTCTTCGGATGCGCGGCGATTTCTTTTAGTACGCACGCAGCTTCTTAAACAAAGAACACCGTGTGAAAATGACCGCC GCAGATGAGAGAACACAGAG
Downstream 100 bases:
>100_bases AAATTCACCATGGAGGGCTTATGGGCAGGATCAACGAACTTCGGATGATATCCCGCGTGGCGCAGATGTATTTCAGCGAG CACAAACGGCAGGCGGAAAT
Product: glycerol kinase 2
Products: NA
Alternate protein names: ATP:glycerol 3-phosphotransferase 2; Glycerokinase 2; GK 2 [H]
Number of amino acids: Translated: 489; Mature: 489
Protein sequence:
>489_residues MRAILSIDQGTTNSKAILVSESGELLARGSSPVGITYPQPGWVEQDPNRIWASVREAISACLAAAPSDVSVEAIAISNQR ESVTIWDGETGEPLGPVLSWQCRRTAQDCADLIAKGQSERVMALTGLPIDPMFPGAKMRWLLERAPKGRKLRLGTIDSWL IHCFTGGKVHACDASNAARSQVLDLNRQVWSDELCDLFGIDINALPDLRDSSGDFGVTSGVPGIKDGTPILAAIGDSHAA LFGHGAFNPGDGKVTFGTGSSVMTTLPHFIAPERGITTTVAWRLGGKPTFAFEGNILVSAASLPWMTDILGLPDVAALVE LAATAEPEGPGFVPAFVGLGAPYWDTNARALFSQINFSTTRAQMARAVTDSIAFQVHDVFAAMRAQSPSGFGRLFVDGGP SQNRFLMQCVADMLEHPVIQRDAPEASALGAAYLAGLALGVWSDLNAIAALNSNGNTIATSTGESRQRLGIWRDAIARST LPVTSGNGE
Sequences:
>Translated_489_residues MRAILSIDQGTTNSKAILVSESGELLARGSSPVGITYPQPGWVEQDPNRIWASVREAISACLAAAPSDVSVEAIAISNQR ESVTIWDGETGEPLGPVLSWQCRRTAQDCADLIAKGQSERVMALTGLPIDPMFPGAKMRWLLERAPKGRKLRLGTIDSWL IHCFTGGKVHACDASNAARSQVLDLNRQVWSDELCDLFGIDINALPDLRDSSGDFGVTSGVPGIKDGTPILAAIGDSHAA LFGHGAFNPGDGKVTFGTGSSVMTTLPHFIAPERGITTTVAWRLGGKPTFAFEGNILVSAASLPWMTDILGLPDVAALVE LAATAEPEGPGFVPAFVGLGAPYWDTNARALFSQINFSTTRAQMARAVTDSIAFQVHDVFAAMRAQSPSGFGRLFVDGGP SQNRFLMQCVADMLEHPVIQRDAPEASALGAAYLAGLALGVWSDLNAIAALNSNGNTIATSTGESRQRLGIWRDAIARST LPVTSGNGE >Mature_489_residues MRAILSIDQGTTNSKAILVSESGELLARGSSPVGITYPQPGWVEQDPNRIWASVREAISACLAAAPSDVSVEAIAISNQR ESVTIWDGETGEPLGPVLSWQCRRTAQDCADLIAKGQSERVMALTGLPIDPMFPGAKMRWLLERAPKGRKLRLGTIDSWL IHCFTGGKVHACDASNAARSQVLDLNRQVWSDELCDLFGIDINALPDLRDSSGDFGVTSGVPGIKDGTPILAAIGDSHAA LFGHGAFNPGDGKVTFGTGSSVMTTLPHFIAPERGITTTVAWRLGGKPTFAFEGNILVSAASLPWMTDILGLPDVAALVE LAATAEPEGPGFVPAFVGLGAPYWDTNARALFSQINFSTTRAQMARAVTDSIAFQVHDVFAAMRAQSPSGFGRLFVDGGP SQNRFLMQCVADMLEHPVIQRDAPEASALGAAYLAGLALGVWSDLNAIAALNSNGNTIATSTGESRQRLGIWRDAIARST LPVTSGNGE
Specific function: Key enzyme in the regulation of glycerol uptake and metabolism [H]
COG id: COG0554
COG function: function code C; Glycerol kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FGGY kinase family [H]
Homologues:
Organism=Homo sapiens, GI189409120, Length=511, Percent_Identity=34.8336594911937, Blast_Score=275, Evalue=9e-74, Organism=Homo sapiens, GI4504007, Length=511, Percent_Identity=34.8336594911937, Blast_Score=274, Evalue=1e-73, Organism=Homo sapiens, GI42794763, Length=515, Percent_Identity=34.5631067961165, Blast_Score=274, Evalue=1e-73, Organism=Homo sapiens, GI41393575, Length=509, Percent_Identity=35.5599214145383, Blast_Score=271, Evalue=8e-73, Organism=Homo sapiens, GI88196792, Length=507, Percent_Identity=27.810650887574, Blast_Score=204, Evalue=2e-52, Organism=Escherichia coli, GI1790361, Length=493, Percent_Identity=37.9310344827586, Blast_Score=318, Evalue=7e-88, Organism=Escherichia coli, GI1789987, Length=445, Percent_Identity=26.2921348314607, Blast_Score=108, Evalue=9e-25, Organism=Escherichia coli, GI1790005, Length=470, Percent_Identity=25.531914893617, Blast_Score=86, Evalue=5e-18, Organism=Escherichia coli, GI1789168, Length=458, Percent_Identity=23.3624454148472, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI1787789, Length=487, Percent_Identity=24.2299794661191, Blast_Score=79, Evalue=7e-16, Organism=Caenorhabditis elegans, GI17535599, Length=448, Percent_Identity=31.25, Blast_Score=223, Evalue=1e-58, Organism=Caenorhabditis elegans, GI71986140, Length=520, Percent_Identity=25.1923076923077, Blast_Score=149, Evalue=3e-36, Organism=Caenorhabditis elegans, GI71986147, Length=292, Percent_Identity=32.8767123287671, Blast_Score=120, Evalue=1e-27, Organism=Saccharomyces cerevisiae, GI6321755, Length=497, Percent_Identity=30.5835010060362, Blast_Score=198, Evalue=1e-51, Organism=Drosophila melanogaster, GI17864214, Length=501, Percent_Identity=32.1357285429142, Blast_Score=243, Evalue=3e-64, Organism=Drosophila melanogaster, GI24655555, Length=495, Percent_Identity=31.9191919191919, Blast_Score=236, Evalue=3e-62, Organism=Drosophila melanogaster, GI24655560, Length=495, Percent_Identity=31.9191919191919, Blast_Score=236, Evalue=3e-62, Organism=Drosophila melanogaster, GI24655570, Length=495, Percent_Identity=31.9191919191919, Blast_Score=236, Evalue=3e-62, Organism=Drosophila melanogaster, GI24655574, Length=495, Percent_Identity=31.9191919191919, Blast_Score=236, Evalue=3e-62, Organism=Drosophila melanogaster, GI24655565, Length=495, Percent_Identity=31.9191919191919, Blast_Score=236, Evalue=3e-62, Organism=Drosophila melanogaster, GI24654573, Length=456, Percent_Identity=32.4561403508772, Blast_Score=220, Evalue=2e-57, Organism=Drosophila melanogaster, GI19922058, Length=514, Percent_Identity=27.0428015564202, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI24652871, Length=488, Percent_Identity=27.0491803278689, Blast_Score=169, Evalue=3e-42, Organism=Drosophila melanogaster, GI24656367, Length=506, Percent_Identity=27.6679841897233, Blast_Score=163, Evalue=3e-40, Organism=Drosophila melanogaster, GI21357867, Length=522, Percent_Identity=26.8199233716475, Blast_Score=158, Evalue=9e-39, Organism=Drosophila melanogaster, GI24656372, Length=359, Percent_Identity=28.6908077994429, Blast_Score=124, Evalue=1e-28, Organism=Drosophila melanogaster, GI45552909, Length=265, Percent_Identity=27.9245283018868, Blast_Score=78, Evalue=1e-14,
Paralogues:
None
Copy number: 2,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000577 - InterPro: IPR018485 - InterPro: IPR018483 - InterPro: IPR018484 - InterPro: IPR005999 [H]
Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]
EC number: =2.7.1.30 [H]
Molecular weight: Translated: 51666; Mature: 51666
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAILSIDQGTTNSKAILVSESGELLARGSSPVGITYPQPGWVEQDPNRIWASVREAISA CCEEEEECCCCCCCCEEEEECCCCEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHH CLAAAPSDVSVEAIAISNQRESVTIWDGETGEPLGPVLSWQCRRTAQDCADLIAKGQSER HHHCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCE VMALTGLPIDPMFPGAKMRWLLERAPKGRKLRLGTIDSWLIHCFTGGKVHACDASNAARS EEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEECCHHHHHHEEECCCEEEEECCCCHHHH QVLDLNRQVWSDELCDLFGIDINALPDLRDSSGDFGVTSGVPGIKDGTPILAAIGDSHAA HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEE LFGHGAFNPGDGKVTFGTGSSVMTTLPHFIAPERGITTTVAWRLGGKPTFAFEGNILVSA EEECCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCEEEEEEEECCCEEEEECCCEEEEE ASLPWMTDILGLPDVAALVELAATAEPEGPGFVPAFVGLGAPYWDTNARALFSQINFSTT CCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHCCHHH RAQMARAVTDSIAFQVHDVFAAMRAQSPSGFGRLFVDGGPSQNRFLMQCVADMLEHPVIQ HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCC RDAPEASALGAAYLAGLALGVWSDLNAIAALNSNGNTIATSTGESRQRLGIWRDAIARST CCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHCC LPVTSGNGE CCCCCCCCC >Mature Secondary Structure MRAILSIDQGTTNSKAILVSESGELLARGSSPVGITYPQPGWVEQDPNRIWASVREAISA CCEEEEECCCCCCCCEEEEECCCCEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHH CLAAAPSDVSVEAIAISNQRESVTIWDGETGEPLGPVLSWQCRRTAQDCADLIAKGQSER HHHCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCE VMALTGLPIDPMFPGAKMRWLLERAPKGRKLRLGTIDSWLIHCFTGGKVHACDASNAARS EEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEECCHHHHHHEEECCCEEEEECCCCHHHH QVLDLNRQVWSDELCDLFGIDINALPDLRDSSGDFGVTSGVPGIKDGTPILAAIGDSHAA HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEE LFGHGAFNPGDGKVTFGTGSSVMTTLPHFIAPERGITTTVAWRLGGKPTFAFEGNILVSA EEECCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCEEEEEEEECCCEEEEECCCEEEEE ASLPWMTDILGLPDVAALVELAATAEPEGPGFVPAFVGLGAPYWDTNARALFSQINFSTT CCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHCCHHH RAQMARAVTDSIAFQVHDVFAAMRAQSPSGFGRLFVDGGPSQNRFLMQCVADMLEHPVIQ HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCC RDAPEASALGAAYLAGLALGVWSDLNAIAALNSNGNTIATSTGESRQRLGIWRDAIARST CCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHCC LPVTSGNGE CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]