Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

Click here to switch to the map view.

The map label for this gene is 159185421

Identifier: 159185421

GI number: 159185421

Start: 1734692

End: 1735216

Strand: Reverse

Name: 159185421

Synonym: Atu8091

Alternate gene names: NA

Gene position: 1735216-1734692 (Counterclockwise)

Preceding gene: 15889051

Following gene: 15889049

Centisome position: 61.07

GC content: 58.1

Gene sequence:

>525_bases
ATGAATGACTATGTGGCCCTGCTGCACAGCATCGTGCTCGGCCCCGGCAAGCGGCTCATCATGGCCGATCTCAGGGCCCT
GGCGGAAGAGCTGGGATTTGCAGAATGCAAGACACTTGTCGCGACCGGAAATCTGGTTTTTTGCGCTGAAGCGGCACCTG
TTCGCGAGATTGAAGACAGGCTGGAGCGTGCCTTTGAGACCCGTTTCGGCAGACATGTCGATATTCTCGTTCGTTCTGGC
AGAGATTGGCTGAAACTGGCGGCGGACAATCCGTTTCCGCATGGCAATCCGCCTGACGTCTGCGTTCGGGTCATGCGGGA
GCCGCTTGACGAGAACGTTCTCGGATTATTCGATAAGTCCCGTCAGCGGGAAGAGGTTGCCGTGGTCGGCGGCGACCTGT
GGATCGATTTTCGGGGCAAACCTAGCGAGAGCAGACTGCTGTCGGTCCTGACCACCAAAAGGCTCGGTATCGGCACGACC
CGCAACGCCAATACGGTCAATGGTCTCGCGGAAATGCTTCGCTGA

Upstream 100 bases:

>100_bases
GCTGCGGCCCTGGTGGCACCAGCGGGCTGGACCCGGTTCCGGAAGAACTCGATGGCAGCAAACGCTGGTGGACGCCGTGG
CGTTACTGGAGCCGGCATCG

Downstream 100 bases:

>100_bases
CCTGCCCTTCACCTTTGACTGGAATGGCAAAAGCCTTTATCAGCCTGCCTGTTCGCTTATCGCGGGCAGATCATTATTCC
AACACCACCCGCATTCGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MNDYVALLHSIVLGPGKRLIMADLRALAEELGFAECKTLVATGNLVFCAEAAPVREIEDRLERAFETRFGRHVDILVRSG
RDWLKLAADNPFPHGNPPDVCVRVMREPLDENVLGLFDKSRQREEVAVVGGDLWIDFRGKPSESRLLSVLTTKRLGIGTT
RNANTVNGLAEMLR

Sequences:

>Translated_174_residues
MNDYVALLHSIVLGPGKRLIMADLRALAEELGFAECKTLVATGNLVFCAEAAPVREIEDRLERAFETRFGRHVDILVRSG
RDWLKLAADNPFPHGNPPDVCVRVMREPLDENVLGLFDKSRQREEVAVVGGDLWIDFRGKPSESRLLSVLTTKRLGIGTT
RNANTVNGLAEMLR
>Mature_174_residues
MNDYVALLHSIVLGPGKRLIMADLRALAEELGFAECKTLVATGNLVFCAEAAPVREIEDRLERAFETRFGRHVDILVRSG
RDWLKLAADNPFPHGNPPDVCVRVMREPLDENVLGLFDKSRQREEVAVVGGDLWIDFRGKPSESRLLSVLTTKRLGIGTT
RNANTVNGLAEMLR

Specific function: Unknown

COG id: COG3797

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19366; Mature: 19366

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDYVALLHSIVLGPGKRLIMADLRALAEELGFAECKTLVATGNLVFCAEAAPVREIEDR
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCEEEEECCCCHHHHHHH
LERAFETRFGRHVDILVRSGRDWLKLAADNPFPHGNPPDVCVRVMREPLDENVLGLFDKS
HHHHHHHHCCCEEEEEECCCCHHEEEECCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHCC
RQREEVAVVGGDLWIDFRGKPSESRLLSVLTTKRLGIGTTRNANTVNGLAEMLR
CCCCCEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHC
>Mature Secondary Structure
MNDYVALLHSIVLGPGKRLIMADLRALAEELGFAECKTLVATGNLVFCAEAAPVREIEDR
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCEEEEECCCCHHHHHHH
LERAFETRFGRHVDILVRSGRDWLKLAADNPFPHGNPPDVCVRVMREPLDENVLGLFDKS
HHHHHHHHCCCEEEEEECCCCHHEEEECCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHCC
RQREEVAVVGGDLWIDFRGKPSESRLLSVLTTKRLGIGTTRNANTVNGLAEMLR
CCCCCEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA