Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is coaD
Identifier: 15888987
GI number: 15888987
Start: 1668170
End: 1668664
Strand: Reverse
Name: coaD
Synonym: Atu1681
Alternate gene names: 15888987
Gene position: 1668664-1668170 (Counterclockwise)
Preceding gene: 15888998
Following gene: 15888986
Centisome position: 58.72
GC content: 60.4
Gene sequence:
>495_bases ATGACGATTGCCTTTTATCCAGGATCATTCGATCCGATGACCAACGGACATCTGGATGTGCTTATCCAGGCGCTGAACGT GGCGTCGAAAGTCATCGTCGCCGTTGGCATCCATCCCGGAAAAGCACCGCTGTTCAGCTTCGACGAGCGGGCGGCACTGA TAAGCCGGGCGCTTTCCGAAACCCTGCCGGGCGAGGCGGCACGCGTGGAAGTCGTGTCCTTCGACAATCTGGTTGTCGAT GCCGCCCGCCAGCATGGCGCGCATCTTTTGCTGCGCGGCCTTCGCGATGGCACCGATCTCGATTATGAAATGCAGATGGC CGGCATGAACCGCCAGATGGCGCCTGATATTCAGACCGTGTTCCTGCCCGCCGGCACCTCGTCGCGACCCATTACAGCCA CATTGGTCCGGCAGATCGCCGCCATGGGCGGCAATGTCGATGCCTTCGTGCCGAAAGCCGTGCTTGAAGCCCTCAACGCC AAGCTGAAGCGCTGA
Upstream 100 bases:
>100_bases TGGCGCGTGGTTATAAAGTCTTGCGCCGCGTGGCTCTCCATGACAAAAGGCGGGCACATGAATATCCAGCATCGAAGCGC GCCCACCATCTGAGAGCGAT
Downstream 100 bases:
>100_bases CTTCAGCCTTACATTCTGGAGCCAATCCGATGAAACTCGTTCGATTTGCCTTTGCCGGCGCCCTGTTTGCCGGCGCGCTT GCCGCCAGCACTTTTGCTTC
Product: phosphopantetheine adenylyltransferase
Products: NA
Alternate protein names: Dephospho-CoA pyrophosphorylase; Pantetheine-phosphate adenylyltransferase; PPAT
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MTIAFYPGSFDPMTNGHLDVLIQALNVASKVIVAVGIHPGKAPLFSFDERAALISRALSETLPGEAARVEVVSFDNLVVD AARQHGAHLLLRGLRDGTDLDYEMQMAGMNRQMAPDIQTVFLPAGTSSRPITATLVRQIAAMGGNVDAFVPKAVLEALNA KLKR
Sequences:
>Translated_164_residues MTIAFYPGSFDPMTNGHLDVLIQALNVASKVIVAVGIHPGKAPLFSFDERAALISRALSETLPGEAARVEVVSFDNLVVD AARQHGAHLLLRGLRDGTDLDYEMQMAGMNRQMAPDIQTVFLPAGTSSRPITATLVRQIAAMGGNVDAFVPKAVLEALNA KLKR >Mature_163_residues TIAFYPGSFDPMTNGHLDVLIQALNVASKVIVAVGIHPGKAPLFSFDERAALISRALSETLPGEAARVEVVSFDNLVVDA ARQHGAHLLLRGLRDGTDLDYEMQMAGMNRQMAPDIQTVFLPAGTSSRPITATLVRQIAAMGGNVDAFVPKAVLEALNAK LKR
Specific function: Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
COG id: COG0669
COG function: function code H; Phosphopantetheine adenylyltransferase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial CoaD family
Homologues:
Organism=Escherichia coli, GI1790065, Length=159, Percent_Identity=41.5094339622642, Blast_Score=134, Evalue=2e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): COAD_AGRT5 (Q8UES4)
Other databases:
- EMBL: AE007869 - PIR: AC2783 - PIR: D97562 - RefSeq: NP_354668.1 - ProteinModelPortal: Q8UES4 - SMR: Q8UES4 - STRING: Q8UES4 - GeneID: 1133719 - GenomeReviews: AE007869_GR - KEGG: atu:Atu1681 - eggNOG: COG0669 - HOGENOM: HBG288308 - OMA: VRQIAAM - ProtClustDB: PRK00168 - BioCyc: ATUM176299-1:ATU1681-MONOMER - GO: GO:0005737 - HAMAP: MF_00151 - InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR001980 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - PRINTS: PR01020 - TIGRFAMs: TIGR01510 - TIGRFAMs: TIGR00125
Pfam domain/function: PF01467 CTP_transf_2
EC number: =2.7.7.3
Molecular weight: Translated: 17552; Mature: 17420
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIAFYPGSFDPMTNGHLDVLIQALNVASKVIVAVGIHPGKAPLFSFDERAALISRALSE CEEEECCCCCCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHH TLPGEAARVEVVSFDNLVVDAARQHGAHLLLRGLRDGTDLDYEMQMAGMNRQMAPDIQTV HCCCCCCEEEEEECCHHHHHHHHHCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCEEE FLPAGTSSRPITATLVRQIAAMGGNVDAFVPKAVLEALNAKLKR EEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TIAFYPGSFDPMTNGHLDVLIQALNVASKVIVAVGIHPGKAPLFSFDERAALISRALSE EEEECCCCCCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHH TLPGEAARVEVVSFDNLVVDAARQHGAHLLLRGLRDGTDLDYEMQMAGMNRQMAPDIQTV HCCCCCCEEEEEECCHHHHHHHHHCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCEEE FLPAGTSSRPITATLVRQIAAMGGNVDAFVPKAVLEALNAKLKR EEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194