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The map label for this gene is 15888886

Identifier: 15888886

GI number: 15888886

Start: 1554829

End: 1555491

Strand: Reverse

Name: 15888886

Synonym: Atu1568

Alternate gene names: NA

Gene position: 1555491-1554829 (Counterclockwise)

Preceding gene: 15888888

Following gene: 159184818

Centisome position: 54.74

GC content: 60.18

Gene sequence:

>663_bases
ATGAGCAATGATGCGGAACGGCCGGCGCGCGCTCGATCCTCCACGCGCGACAGGATTCTGGACGCCGCTCTCGATCTCTT
CAACGGGCGGGGGCCAGACCGTGTGACAACGGCGGAGATTGCCGAAGCGGTGAAGATCAACGAGGGCAATCTCTATTACC
ATTTCCGTACCAAGGAATTGCTGGTTCTTGCCCTGTTTGCGCGTTTCGAGGTCGATGCGGTGGCGTTGGTCGCAAGTGTC
GATAGGGCGGATGAAGGGGCGGCGGAAACCTATGCCGGTTTCCTGCGGCAATGGTTCTCGCTGGTGTGGAATTACCGCTT
TCTGTTTCGTGATCTCGTCGGTCTGCTTGCGCTCGCGCCGGGGCTGGTGGAGCCGGTGAGGACGATAAGTGCTGCGATGC
GGCTTGCCGTCGGAGACATTATCGGGCGCATGCAGAAAGCGGGGCTCATAACTATTCCCGAAAGCGAGCGCGATGCGGTT
TTGACCAATCTGTGGATCGTCTCGACCTATTGGGCCGCCTATCTCGCTCTGCAGGAAGGTGTCAGCGAATTTGGGCCGCA
GCAACTGGAGTGGGGCTTGCGGCAGGTCTCAAGCCTGTTCAGGCCTTACCTCTCGGCGGACGCCATCGCCGCGCTCGAAG
CGCTTGCCACAAGCGAAGCGTAA

Upstream 100 bases:

>100_bases
GCCCGTTGAACAATGGCAACTTGCTGTTAAGGTGCATACCTTATTTTGACTGATTTAAGGTGAGTACCTTAAATTTCAAT
AGCGGGATGCGATTTCGATA

Downstream 100 bases:

>100_bases
TATCTCCAGTCGGAGACAGGAGACAAAAAACACCCGCGGCGAGATTGCCGCGGGTGCCTTCATTCCCTGGAAAAATTGTC
GGTTATATCAGGCTGCCTTC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator PhaD; Regulatory Protein TetR; TetR Family Regulatory Protein; Transcriptional Reguator TetR Family; HTH-Type Transcriptional Regulator TetR-Family; HTH-Type Transcriptional Regulator; Transcriptional Regulator Tetr Family; Transcriptional Regulator Transcription Regulator Protein; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MSNDAERPARARSSTRDRILDAALDLFNGRGPDRVTTAEIAEAVKINEGNLYYHFRTKELLVLALFARFEVDAVALVASV
DRADEGAAETYAGFLRQWFSLVWNYRFLFRDLVGLLALAPGLVEPVRTISAAMRLAVGDIIGRMQKAGLITIPESERDAV
LTNLWIVSTYWAAYLALQEGVSEFGPQQLEWGLRQVSSLFRPYLSADAIAALEALATSEA

Sequences:

>Translated_220_residues
MSNDAERPARARSSTRDRILDAALDLFNGRGPDRVTTAEIAEAVKINEGNLYYHFRTKELLVLALFARFEVDAVALVASV
DRADEGAAETYAGFLRQWFSLVWNYRFLFRDLVGLLALAPGLVEPVRTISAAMRLAVGDIIGRMQKAGLITIPESERDAV
LTNLWIVSTYWAAYLALQEGVSEFGPQQLEWGLRQVSSLFRPYLSADAIAALEALATSEA
>Mature_219_residues
SNDAERPARARSSTRDRILDAALDLFNGRGPDRVTTAEIAEAVKINEGNLYYHFRTKELLVLALFARFEVDAVALVASVD
RADEGAAETYAGFLRQWFSLVWNYRFLFRDLVGLLALAPGLVEPVRTISAAMRLAVGDIIGRMQKAGLITIPESERDAVL
TNLWIVSTYWAAYLALQEGVSEFGPQQLEWGLRQVSSLFRPYLSADAIAALEALATSEA

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24327; Mature: 24196

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNDAERPARARSSTRDRILDAALDLFNGRGPDRVTTAEIAEAVKINEGNLYYHFRTKEL
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEECCCCEEEEEEHHHH
LVLALFARFEVDAVALVASVDRADEGAAETYAGFLRQWFSLVWNYRFLFRDLVGLLALAP
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GLVEPVRTISAAMRLAVGDIIGRMQKAGLITIPESERDAVLTNLWIVSTYWAAYLALQEG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VSEFGPQQLEWGLRQVSSLFRPYLSADAIAALEALATSEA
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SNDAERPARARSSTRDRILDAALDLFNGRGPDRVTTAEIAEAVKINEGNLYYHFRTKEL
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEECCCCEEEEEEHHHH
LVLALFARFEVDAVALVASVDRADEGAAETYAGFLRQWFSLVWNYRFLFRDLVGLLALAP
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GLVEPVRTISAAMRLAVGDIIGRMQKAGLITIPESERDAVLTNLWIVSTYWAAYLALQEG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VSEFGPQQLEWGLRQVSSLFRPYLSADAIAALEALATSEA
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA