Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 15888888

Identifier: 15888888

GI number: 15888888

Start: 1557057

End: 1557374

Strand: Reverse

Name: 15888888

Synonym: Atu1570

Alternate gene names: NA

Gene position: 1557374-1557057 (Counterclockwise)

Preceding gene: 159184820

Following gene: 15888886

Centisome position: 54.81

GC content: 53.14

Gene sequence:

>318_bases
GTGAATATTGCACTCGTCCATGGGAAAGACATGGGCGATGTGCCGCTTTCACTTTACTTTCGCCTTTGTCCCATGCCAAA
AGCGGCCCAACCCGAACCGCACAGGAGAATAGTGGTGAAAGCCGACGAAATCAAAAAACTCGACGCCTATTTCAAGCGCA
CCTTCAACGAGAAGATGATCGTCAAGGCGCGTCCGCGCAAGGATGATTCCGCCGAAGTGTATCTGGGCGAAGAGTTTCTC
GGCGTCGTCTACATCGATGACGAAGACGGCGACCGCTCGTACAACTTCTCCATGGCGATCCTTGACGTCGATCTCTGA

Upstream 100 bases:

>100_bases
CACGGTTGCCGGCGTGCCGGCGCGGGTGGTGGGAGAAGCAGGGTGTTCGGAACCCTCGCGTCTGATGGACCAGCTCATCG
GGGCCGATATCTGAGAGGCC

Downstream 100 bases:

>100_bases
TCGGCACCATCCGGTGACGGATGGGTTTTCGCATTAAAACAGTCGCCCGTGGTGGTTACACCGCGGGCGATTTGTTTTGT
CGCTGGGTGATTTTCATCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MNIALVHGKDMGDVPLSLYFRLCPMPKAAQPEPHRRIVVKADEIKKLDAYFKRTFNEKMIVKARPRKDDSAEVYLGEEFL
GVVYIDDEDGDRSYNFSMAILDVDL

Sequences:

>Translated_105_residues
MNIALVHGKDMGDVPLSLYFRLCPMPKAAQPEPHRRIVVKADEIKKLDAYFKRTFNEKMIVKARPRKDDSAEVYLGEEFL
GVVYIDDEDGDRSYNFSMAILDVDL
>Mature_105_residues
MNIALVHGKDMGDVPLSLYFRLCPMPKAAQPEPHRRIVVKADEIKKLDAYFKRTFNEKMIVKARPRKDDSAEVYLGEEFL
GVVYIDDEDGDRSYNFSMAILDVDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12081; Mature: 12081

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIALVHGKDMGDVPLSLYFRLCPMPKAAQPEPHRRIVVKADEIKKLDAYFKRTFNEKMI
CEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCEEE
VKARPRKDDSAEVYLGEEFLGVVYIDDEDGDRSYNFSMAILDVDL
EEECCCCCCCCEEEECCCEEEEEEEECCCCCCEEEEEEEEEEECC
>Mature Secondary Structure
MNIALVHGKDMGDVPLSLYFRLCPMPKAAQPEPHRRIVVKADEIKKLDAYFKRTFNEKMI
CEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCEEE
VKARPRKDDSAEVYLGEEFLGVVYIDDEDGDRSYNFSMAILDVDL
EEECCCCCCCCEEEECCCEEEEEEEECCCCCCEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA