Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15888888
Identifier: 15888888
GI number: 15888888
Start: 1557057
End: 1557374
Strand: Reverse
Name: 15888888
Synonym: Atu1570
Alternate gene names: NA
Gene position: 1557374-1557057 (Counterclockwise)
Preceding gene: 159184820
Following gene: 15888886
Centisome position: 54.81
GC content: 53.14
Gene sequence:
>318_bases GTGAATATTGCACTCGTCCATGGGAAAGACATGGGCGATGTGCCGCTTTCACTTTACTTTCGCCTTTGTCCCATGCCAAA AGCGGCCCAACCCGAACCGCACAGGAGAATAGTGGTGAAAGCCGACGAAATCAAAAAACTCGACGCCTATTTCAAGCGCA CCTTCAACGAGAAGATGATCGTCAAGGCGCGTCCGCGCAAGGATGATTCCGCCGAAGTGTATCTGGGCGAAGAGTTTCTC GGCGTCGTCTACATCGATGACGAAGACGGCGACCGCTCGTACAACTTCTCCATGGCGATCCTTGACGTCGATCTCTGA
Upstream 100 bases:
>100_bases CACGGTTGCCGGCGTGCCGGCGCGGGTGGTGGGAGAAGCAGGGTGTTCGGAACCCTCGCGTCTGATGGACCAGCTCATCG GGGCCGATATCTGAGAGGCC
Downstream 100 bases:
>100_bases TCGGCACCATCCGGTGACGGATGGGTTTTCGCATTAAAACAGTCGCCCGTGGTGGTTACACCGCGGGCGATTTGTTTTGT CGCTGGGTGATTTTCATCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 105; Mature: 105
Protein sequence:
>105_residues MNIALVHGKDMGDVPLSLYFRLCPMPKAAQPEPHRRIVVKADEIKKLDAYFKRTFNEKMIVKARPRKDDSAEVYLGEEFL GVVYIDDEDGDRSYNFSMAILDVDL
Sequences:
>Translated_105_residues MNIALVHGKDMGDVPLSLYFRLCPMPKAAQPEPHRRIVVKADEIKKLDAYFKRTFNEKMIVKARPRKDDSAEVYLGEEFL GVVYIDDEDGDRSYNFSMAILDVDL >Mature_105_residues MNIALVHGKDMGDVPLSLYFRLCPMPKAAQPEPHRRIVVKADEIKKLDAYFKRTFNEKMIVKARPRKDDSAEVYLGEEFL GVVYIDDEDGDRSYNFSMAILDVDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12081; Mature: 12081
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIALVHGKDMGDVPLSLYFRLCPMPKAAQPEPHRRIVVKADEIKKLDAYFKRTFNEKMI CEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCEEE VKARPRKDDSAEVYLGEEFLGVVYIDDEDGDRSYNFSMAILDVDL EEECCCCCCCCEEEECCCEEEEEEEECCCCCCEEEEEEEEEEECC >Mature Secondary Structure MNIALVHGKDMGDVPLSLYFRLCPMPKAAQPEPHRRIVVKADEIKKLDAYFKRTFNEKMI CEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCEEE VKARPRKDDSAEVYLGEEFLGVVYIDDEDGDRSYNFSMAILDVDL EEECCCCCCCCEEEECCCEEEEEEEECCCCCCEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA