Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is 159184818
Identifier: 159184818
GI number: 159184818
Start: 1553110
End: 1553352
Strand: Reverse
Name: 159184818
Synonym: Atu1566
Alternate gene names: NA
Gene position: 1553352-1553110 (Counterclockwise)
Preceding gene: 15888886
Following gene: 159184817
Centisome position: 54.67
GC content: 52.26
Gene sequence:
>243_bases CTGGCTGACAACTCCTCCTCGGCCCGTACATCGCCAACAAACCATGGGAAACGCAGTTTGTCCTTCGGAAATACGACACG CCGTGTGGTCGCAACGACACGTAATCCGACATATTCGTTCTTCACTCAGCAGACGAAAGCCTTCATGATAATTTGTCTGG ATCGATGGCGAAATCGGCTACCGGCAGGAATAACCCAAAGCAGCAAAGAGGCTTGGGAAGAATGGCGGCCGCTCTTCGCA TAA
Upstream 100 bases:
>100_bases CGTCGAAGGATGTGCGAGATTTTGAGCTGTAAACTCAGTTACCCGGATAGCCTCTCAATCATCGCATCGCGGCCACCGAA ATGTTGCGGAGGTCGGCTAT
Downstream 100 bases:
>100_bases AATTTATATTGTAGTCGATAAATTGCACTGTGTGTTTTTGGAGTTTAATATGTCTGTATTTAAGAAAATATATTTTGCTT TATCCGCATTTATTGTTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 80; Mature: 79
Protein sequence:
>80_residues MADNSSSARTSPTNHGKRSLSFGNTTRRVVATTRNPTYSFFTQQTKAFMIICLDRWRNRLPAGITQSSKEAWEEWRPLFA
Sequences:
>Translated_80_residues MADNSSSARTSPTNHGKRSLSFGNTTRRVVATTRNPTYSFFTQQTKAFMIICLDRWRNRLPAGITQSSKEAWEEWRPLFA >Mature_79_residues ADNSSSARTSPTNHGKRSLSFGNTTRRVVATTRNPTYSFFTQQTKAFMIICLDRWRNRLPAGITQSSKEAWEEWRPLFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9183; Mature: 9052
Theoretical pI: Translated: 11.74; Mature: 11.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADNSSSARTSPTNHGKRSLSFGNTTRRVVATTRNPTYSFFTQQTKAFMIICLDRWRNRL CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHCCCEEHEEEHHHHHCCC PAGITQSSKEAWEEWRPLFA CCCCCCCCHHHHHHCCCCCC >Mature Secondary Structure ADNSSSARTSPTNHGKRSLSFGNTTRRVVATTRNPTYSFFTQQTKAFMIICLDRWRNRL CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHCCCEEHEEEHHHHHCCC PAGITQSSKEAWEEWRPLFA CCCCCCCCHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA