Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is nuoH
Identifier: 15888606
GI number: 15888606
Start: 1264347
End: 1265393
Strand: Direct
Name: nuoH
Synonym: Atu1277
Alternate gene names: 15888606
Gene position: 1264347-1265393 (Clockwise)
Preceding gene: 159184690
Following gene: 15888607
Centisome position: 44.49
GC content: 59.31
Gene sequence:
>1047_bases ATGGAACAGTTTTTCTGGAGCTACGTCTGGCCCGCGCTGATCATGGTCGGCCAGTCCCTGCTGCTTCTCGTTTGCCTTCT GGTGGCCATCGCCTTCCTGCTGCTTGCCGACCGTAAGGTCTGGGCAGCCGTGCAGCTGCGCCGTGGTCCGAACGTCGTTG GTCCCTTCGGTCTCTTCCAGTCCTTCGCCGACCTCTTGAAGTTCATCCTGAAGGAGCCCGTCATTCCGGCCGGCGCCAAC AAGGCGGTCTTCCTTCTGGCGCCGCTGGTTGCCGTGACGCTGGCGCTCGCTACCTATGCCGTTATTCCGTTTGCGGATGG CTGGGTCGTCGCCAATATCAATGTCGGCATTCTCTACATCTTCGCGATTTCCTCGCTTGAAGTGTACGGCATCATCATGG GCGGCTGGGCTTCGAACTCGAAGTATCCGTTCCTTGGCGCGCTGCGTTCGGCCGCGCAGATGGTGTCCTACGAAGTGTCG ATCGGTCTCGTCATCGTTACCGTTCTGCTCTGCGTCGGCTCGCTGAACCTGACGGACATCGTTCTTGCCCAGCGCACCGG GCTCGGCACCATGATGGGTCTGCCGGCCTCGTTCCTCGACTGGCACTGGCTGTCGCTGTTCCCGATGTTCATCGTGTTCT TCATTTCCGGCCTTGCCGAAACCAACCGTCCGCCCTTCGATCTTCCGGAAGCGGAATCGGAACTGGTCGCCGGTCACATG GTCGAATATGGCTCGACGCCTTACATGATGTTCATGCTCGGCGAATATGCTGCGATCGTCCTGATCTGCTGCCTGACGAC GATCCTGTTCCTCGGCGGCTGGCTGCCGATCGTGGATGTGTGGTTCCTGAACTGGGTTCCGGGCATTGTCTGGTTCGCGT TGAAGGGCTGCATGGTCTTCTTCATGATCGCGCTCACCAAGGCTTTCGTTCCGCGTTACCGTTATGACCAGCTCATGCGC CTTGGCTGGAAGGTCTTCCTGCCGCTGTCGCTCGCCATGGTCGTTATTGTTGCATTCGTATTGAAGCTGACGGGGTGGGC CGGTTGA
Upstream 100 bases:
>100_bases TTGACGAACCCGATTGCGCGCGCCTCAGCTGTGATGGCCGAGTGCTCCGCATTGGCCCGCAACAATTTCCAGGCTGCGGC AGAGTAAGGGTAGGGGATTT
Downstream 100 bases:
>100_bases TGTCTGTATTCCCCGCGCAGAAATCTGGAGACTGAGATGGCAAGCCTCTCCCAAGCCGTCAACTCGCTGTTCCTGAAGGA ATTCGTAGGCGCGATCTTCC
Product: NADH dehydrogenase subunit H
Products: NA
Alternate protein names: NADH dehydrogenase I subunit H; NDH-1 subunit H
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MEQFFWSYVWPALIMVGQSLLLLVCLLVAIAFLLLADRKVWAAVQLRRGPNVVGPFGLFQSFADLLKFILKEPVIPAGAN KAVFLLAPLVAVTLALATYAVIPFADGWVVANINVGILYIFAISSLEVYGIIMGGWASNSKYPFLGALRSAAQMVSYEVS IGLVIVTVLLCVGSLNLTDIVLAQRTGLGTMMGLPASFLDWHWLSLFPMFIVFFISGLAETNRPPFDLPEAESELVAGHM VEYGSTPYMMFMLGEYAAIVLICCLTTILFLGGWLPIVDVWFLNWVPGIVWFALKGCMVFFMIALTKAFVPRYRYDQLMR LGWKVFLPLSLAMVVIVAFVLKLTGWAG
Sequences:
>Translated_348_residues MEQFFWSYVWPALIMVGQSLLLLVCLLVAIAFLLLADRKVWAAVQLRRGPNVVGPFGLFQSFADLLKFILKEPVIPAGAN KAVFLLAPLVAVTLALATYAVIPFADGWVVANINVGILYIFAISSLEVYGIIMGGWASNSKYPFLGALRSAAQMVSYEVS IGLVIVTVLLCVGSLNLTDIVLAQRTGLGTMMGLPASFLDWHWLSLFPMFIVFFISGLAETNRPPFDLPEAESELVAGHM VEYGSTPYMMFMLGEYAAIVLICCLTTILFLGGWLPIVDVWFLNWVPGIVWFALKGCMVFFMIALTKAFVPRYRYDQLMR LGWKVFLPLSLAMVVIVAFVLKLTGWAG >Mature_348_residues MEQFFWSYVWPALIMVGQSLLLLVCLLVAIAFLLLADRKVWAAVQLRRGPNVVGPFGLFQSFADLLKFILKEPVIPAGAN KAVFLLAPLVAVTLALATYAVIPFADGWVVANINVGILYIFAISSLEVYGIIMGGWASNSKYPFLGALRSAAQMVSYEVS IGLVIVTVLLCVGSLNLTDIVLAQRTGLGTMMGLPASFLDWHWLSLFPMFIVFFISGLAETNRPPFDLPEAESELVAGHM VEYGSTPYMMFMLGEYAAIVLICCLTTILFLGGWLPIVDVWFLNWVPGIVWFALKGCMVFFMIALTKAFVPRYRYDQLMR LGWKVFLPLSLAMVVIVAFVLKLTGWAG
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG1005
COG function: function code C; NADH:ubiquinone oxidoreductase subunit 1 (chain H)
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the complex I subunit 1 family
Homologues:
Organism=Homo sapiens, GI251831107, Length=307, Percent_Identity=41.042345276873, Blast_Score=228, Evalue=5e-60, Organism=Escherichia coli, GI1788618, Length=340, Percent_Identity=39.4117647058824, Blast_Score=236, Evalue=2e-63,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NUOH_AGRT5 (Q8UFX0)
Other databases:
- EMBL: AE007869 - PIR: AE2733 - PIR: G97514 - RefSeq: NP_354287.1 - STRING: Q8UFX0 - GeneID: 1133315 - GenomeReviews: AE007869_GR - KEGG: atu:Atu1277 - eggNOG: COG1005 - HOGENOM: HBG727670 - OMA: FMVEYGS - PhylomeDB: Q8UFX0 - ProtClustDB: PRK06076 - BioCyc: ATUM176299-1:ATU1277-MONOMER - HAMAP: MF_01350 - InterPro: IPR023020 - InterPro: IPR001694 - InterPro: IPR018086 - PANTHER: PTHR11432
Pfam domain/function: PF00146 NADHdh
EC number: =1.6.99.5
Molecular weight: Translated: 38449; Mature: 38449
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: PS00667 COMPLEX1_ND1_1; PS00668 COMPLEX1_ND1_2
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xe429e00)-; HASH(0xe9dd6b8)-; HASH(0xe7c3310)-; HASH(0xe6a6228)-; HASH(0xb4fa0f4)-; HASH(0xe9dd604)-; HASH(0xe8beb8c)-; HASH(0xe010bc8)-; HASH(0xd50d8f4)-;
Cys/Met content:
1.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQFFWSYVWPALIMVGQSLLLLVCLLVAIAFLLLADRKVWAAVQLRRGPNVVGPFGLFQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHH SFADLLKFILKEPVIPAGANKAVFLLAPLVAVTLALATYAVIPFADGWVVANINVGILYI HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHH FAISSLEVYGIIMGGWASNSKYPFLGALRSAAQMVSYEVSIGLVIVTVLLCVGSLNLTDI HHHHHHHEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH VLAQRTGLGTMMGLPASFLDWHWLSLFPMFIVFFISGLAETNRPPFDLPEAESELVAGHM HHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH VEYGSTPYMMFMLGEYAAIVLICCLTTILFLGGWLPIVDVWFLNWVPGIVWFALKGCMVF HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FMIALTKAFVPRYRYDQLMRLGWKVFLPLSLAMVVIVAFVLKLTGWAG HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH >Mature Secondary Structure MEQFFWSYVWPALIMVGQSLLLLVCLLVAIAFLLLADRKVWAAVQLRRGPNVVGPFGLFQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHH SFADLLKFILKEPVIPAGANKAVFLLAPLVAVTLALATYAVIPFADGWVVANINVGILYI HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHH FAISSLEVYGIIMGGWASNSKYPFLGALRSAAQMVSYEVSIGLVIVTVLLCVGSLNLTDI HHHHHHHEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH VLAQRTGLGTMMGLPASFLDWHWLSLFPMFIVFFISGLAETNRPPFDLPEAESELVAGHM HHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH VEYGSTPYMMFMLGEYAAIVLICCLTTILFLGGWLPIVDVWFLNWVPGIVWFALKGCMVF HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FMIALTKAFVPRYRYDQLMRLGWKVFLPLSLAMVVIVAFVLKLTGWAG HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194