Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 15888426

Identifier: 15888426

GI number: 15888426

Start: 1074272

End: 1074574

Strand: Direct

Name: 15888426

Synonym: Atu1083

Alternate gene names: NA

Gene position: 1074272-1074574 (Clockwise)

Preceding gene: 15888425

Following gene: 159184606

Centisome position: 37.81

GC content: 66.67

Gene sequence:

>303_bases
ATGACGCTCGATCCGAACACGCTCCTGACGATCCTCGCCATGATGGCGGCAACTGTTACAACGCGCCTTGGCGGCCTGCT
GCTGGTCAGTCATTTCACCCTGACGCCGCGTCTGAAAAAGGCGCTCGGCGTGGTGCCGCCTGCCGTCCTGATGGCCGTGG
TCACGCCGACTGCACTCGCCAGCGGGGCGGCCGAAACTATCGCCTGCGCGGTAACGGCAATCGCGGCGCTGCGGCTCAGC
CTGCTGCCGGCCGCCACGCTCGGCGTCGTCACCGTGGCGTTGCTGCGCGGAATCGGATTGTAA

Upstream 100 bases:

>100_bases
CCCACGCGCTGGTCCCGGGCGCCTGGTATATCGCCGCCGGCGCGATGGCGGGGCTTGCGGTCGCCGCCTTCGGCCGTGCG
GAACAGGTGGAGCAGCCGGC

Downstream 100 bases:

>100_bases
GAAAATCGCGCCAACGTCCTGAAAAGACTCCGGACTCGGCGTCTGTAATGCGAAGCGGGCAGCGGGGGTGAAAATATGTC
ACCCTCGCTGTGTTTTGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 99

Protein sequence:

>100_residues
MTLDPNTLLTILAMMAATVTTRLGGLLLVSHFTLTPRLKKALGVVPPAVLMAVVTPTALASGAAETIACAVTAIAALRLS
LLPAATLGVVTVALLRGIGL

Sequences:

>Translated_100_residues
MTLDPNTLLTILAMMAATVTTRLGGLLLVSHFTLTPRLKKALGVVPPAVLMAVVTPTALASGAAETIACAVTAIAALRLS
LLPAATLGVVTVALLRGIGL
>Mature_99_residues
TLDPNTLLTILAMMAATVTTRLGGLLLVSHFTLTPRLKKALGVVPPAVLMAVVTPTALASGAAETIACAVTAIAALRLSL
LPAATLGVVTVALLRGIGL

Specific function: Unknown

COG id: COG4541

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10027; Mature: 9896

Theoretical pI: Translated: 11.48; Mature: 11.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLDPNTLLTILAMMAATVTTRLGGLLLVSHFTLTPRLKKALGVVPPAVLMAVVTPTALA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHH
SGAAETIACAVTAIAALRLSLLPAATLGVVTVALLRGIGL
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TLDPNTLLTILAMMAATVTTRLGGLLLVSHFTLTPRLKKALGVVPPAVLMAVVTPTALA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHH
SGAAETIACAVTAIAALRLSLLPAATLGVVTVALLRGIGL
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA