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The map label for this gene is sipf [H]

Identifier: 15888376

GI number: 15888376

Start: 1026692

End: 1027438

Strand: Direct

Name: sipf [H]

Synonym: Atu1034

Alternate gene names: 15888376

Gene position: 1026692-1027438 (Clockwise)

Preceding gene: 15888375

Following gene: 159184588

Centisome position: 36.13

GC content: 57.97

Gene sequence:

>747_bases
GTGTCCGAAAAAGCTGAGAAGAAGCAGAACGCCCTCTGGGAGAACGTCAAGGTCATCATTCAGGCGCTGCTGCTGGCAAT
GGTCATCCGCACCGTGCTGTTTCAGCCCTTCACGATCCCGTCAGGCTCGATGATGCCGACACTTCTGGTTGGCGATTATC
TGTTCGTCAACAAGTTCTCCTACGGCTATTCGAAATATTCGCTGCCCTTTTCGCCGAACCTCTTTTCCGGCCGCATCCTC
GAATTCAGCAAGCCGAAGCGCGGCGATGTCGTGGTCTTCCGCCTGCCGCCCAATCCTGAAGTGGATTACATCAAGCGTCT
CGTCGGCTTGCCCGGTGACCGCGTGCAGGTGACGAACGGCGTGCTGTTCATCAACGGCCAGCCGGTTCCGAAGCAGCCCG
ATGGCACCTTCACCTCCGATTATCGGGCCGATCCGGGCACCAATGTGCCGGTCTTCCGCGAAACGCTAGACAATGGCGTC
ACTTACGACACGCTCGACCAGTCGCCCGACTCACGCGGCGACAACACCCGCGAATTCGTGGTGCCCGAAGGCCATTATTT
CATGATGGGCGACAACAGAGATAATTCGCTCGACAGCCGTTTCGACGTCGGTTTCGTACCGGAAGAAAACCTGATCGGCC
GCGCCAGCGTCATCTTCTTCTCGCTGGGCAATGACACGCCGTTCAGCCGCATTTGGGAATGGCCTGCCAACATGCGTTGG
GACCGCCTGTTCAAGGTTGTGGGATGA

Upstream 100 bases:

>100_bases
CGGCTGCGTGAAACAGCATCACCCGCCGCAGGCGCGATAAGCAACGGCCCGGGAGCTTCTGAAATCGAAGGAGCCGGGGA
ACAATCAGGCAGGTCTATAA

Downstream 100 bases:

>100_bases
GCAAGACCAAGCCGCTTTCCGCGGACGAAATTTCCCGTCTGGAAGCGTTGATCGGATATGAATTCAAGGAAAAGGCCCGG
CTCGACCGGGCCTTGACCCA

Product: type I signal peptidase

Products: NA

Alternate protein names: SPase I; Leader peptidase I [H]

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MSEKAEKKQNALWENVKVIIQALLLAMVIRTVLFQPFTIPSGSMMPTLLVGDYLFVNKFSYGYSKYSLPFSPNLFSGRIL
EFSKPKRGDVVVFRLPPNPEVDYIKRLVGLPGDRVQVTNGVLFINGQPVPKQPDGTFTSDYRADPGTNVPVFRETLDNGV
TYDTLDQSPDSRGDNTREFVVPEGHYFMMGDNRDNSLDSRFDVGFVPEENLIGRASVIFFSLGNDTPFSRIWEWPANMRW
DRLFKVVG

Sequences:

>Translated_248_residues
MSEKAEKKQNALWENVKVIIQALLLAMVIRTVLFQPFTIPSGSMMPTLLVGDYLFVNKFSYGYSKYSLPFSPNLFSGRIL
EFSKPKRGDVVVFRLPPNPEVDYIKRLVGLPGDRVQVTNGVLFINGQPVPKQPDGTFTSDYRADPGTNVPVFRETLDNGV
TYDTLDQSPDSRGDNTREFVVPEGHYFMMGDNRDNSLDSRFDVGFVPEENLIGRASVIFFSLGNDTPFSRIWEWPANMRW
DRLFKVVG
>Mature_247_residues
SEKAEKKQNALWENVKVIIQALLLAMVIRTVLFQPFTIPSGSMMPTLLVGDYLFVNKFSYGYSKYSLPFSPNLFSGRILE
FSKPKRGDVVVFRLPPNPEVDYIKRLVGLPGDRVQVTNGVLFINGQPVPKQPDGTFTSDYRADPGTNVPVFRETLDNGVT
YDTLDQSPDSRGDNTREFVVPEGHYFMMGDNRDNSLDSRFDVGFVPEENLIGRASVIFFSLGNDTPFSRIWEWPANMRWD
RLFKVVG

Specific function: Unknown

COG id: COG0681

COG function: function code U; Signal peptidase I

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein (Potential) [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S26 family [H]

Homologues:

Organism=Escherichia coli, GI1788921, Length=275, Percent_Identity=34.9090909090909, Blast_Score=150, Evalue=6e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000223
- InterPro:   IPR019758
- InterPro:   IPR019757
- InterPro:   IPR019759
- InterPro:   IPR015927
- InterPro:   IPR011056 [H]

Pfam domain/function: PF00717 Peptidase_S24 [H]

EC number: =3.4.21.89 [H]

Molecular weight: Translated: 28133; Mature: 28002

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: PS00501 SPASE_I_1 ; PS00760 SPASE_I_2 ; PS00761 SPASE_I_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEKAEKKQNALWENVKVIIQALLLAMVIRTVLFQPFTIPSGSMMPTLLVGDYLFVNKFS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCEEEEEC
YGYSKYSLPFSPNLFSGRILEFSKPKRGDVVVFRLPPNPEVDYIKRLVGLPGDRVQVTNG
CCCEEEECCCCCCCCCCEEEECCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEECC
VLFINGQPVPKQPDGTFTSDYRADPGTNVPVFRETLDNGVTYDTLDQSPDSRGDNTREFV
EEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEECCCCCCCCCCCCCCEEEE
VPEGHYFMMGDNRDNSLDSRFDVGFVPEENLIGRASVIFFSLGNDTPFSRIWEWPANMRW
ECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHCCCCCCCH
DRLFKVVG
HHHHHHCC
>Mature Secondary Structure 
SEKAEKKQNALWENVKVIIQALLLAMVIRTVLFQPFTIPSGSMMPTLLVGDYLFVNKFS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCEEEEEC
YGYSKYSLPFSPNLFSGRILEFSKPKRGDVVVFRLPPNPEVDYIKRLVGLPGDRVQVTNG
CCCEEEECCCCCCCCCCEEEECCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEECC
VLFINGQPVPKQPDGTFTSDYRADPGTNVPVFRETLDNGVTYDTLDQSPDSRGDNTREFV
EEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEECCCCCCCCCCCCCCEEEE
VPEGHYFMMGDNRDNSLDSRFDVGFVPEENLIGRASVIFFSLGNDTPFSRIWEWPANMRW
ECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHCCCCCCCH
DRLFKVVG
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA