Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is fabI [H]
Identifier: 15888100
GI number: 15888100
Start: 754209
End: 755027
Strand: Reverse
Name: fabI [H]
Synonym: Atu0757
Alternate gene names: 15888100
Gene position: 755027-754209 (Counterclockwise)
Preceding gene: 159184453
Following gene: 15888099
Centisome position: 26.57
GC content: 58.73
Gene sequence:
>819_bases ATGGCTCAGGCATCCGGCCTCATGGCTGGCAAACGCGGCCTCATCATGGGCGTCGCCAATAACCGTTCAATCGCTTGGGG CATTGCAAAGGCCTGCGCGGATGCAGGTGCGGAACTCGCACTCACCTGGCAGGGTGACGCATTGAAGAAGCGCGTCGAGC CTCTCGCGCAGGAACTCGGCGCTTTCATGGCCGGCCATTGCGACGTGACCGATCTCGAGACGATCGACTCCGTTTTTGCC TCGCTGGAACAGCATTGGGGCAAGATCGACTTCGTCGTGCACGCCATTGCGTTCTCCGACAAAGACGAGCTGACCGGCCG TTATCTCGATACCAGCCGCGACAACTTCAACCGCACCATGGATATTTCCGTGTTCTCGCTGGCCGCCGTTGCAAAGCGCG CAGAGCCCATCATGAATGACGGCGGTTCGATCATCACGCTTACCTATTACGGCGCCGAAAAGGTCATGCCGAATTACAAC GTGATGGGCGTGGCCAAGGCCGCTCTTGAAGCCAGCGTGCGTTATCTCGCCGTCGACCTCGGTAATCGCGGCATCCGCGT CAACGCCGTTTCCGCCGGCCCGATCAAGACGCTTGCGGCTTCCGGCATCGGCGATTTCCGTTACATTCTGAAGTGGAACG AATATAATGCGCCGCTGAAGCGCACCGTTACCATCGAGGAAGTCGGCAAGTCGGCGCTCTACCTGTTGTCCGACCTTTCG ACGGCCGTGACCGGTGAAATCCACCATGTCGATTCCGGCTATCACACCATCGGCATGAAGGCAGTGGATGCGCCTGACAT TTCGGTCGTTAAGGACTAA
Upstream 100 bases:
>100_bases TTTGTTACGCTCCCTAACAGTTGATGATCTTTGGCAATCTTGAACAGGATTGCAGCCTATGCCATAGGCAGGACCGATCA AAAGTATTAGGGAGCACAAA
Downstream 100 bases:
>100_bases GCCTGCGACGTTTGAAAACGGGGTATCGCCTTGCTCGTCTATGTGATCCGACACGGACAAACGGACTGGAATGCGATACG CCGGCTTCAGGGCCAGAAAG
Product: enoyl-(acyl carrier protein) reductase
Products: NA
Alternate protein names: NADH-dependent enoyl-ACP reductase 1 [H]
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MAQASGLMAGKRGLIMGVANNRSIAWGIAKACADAGAELALTWQGDALKKRVEPLAQELGAFMAGHCDVTDLETIDSVFA SLEQHWGKIDFVVHAIAFSDKDELTGRYLDTSRDNFNRTMDISVFSLAAVAKRAEPIMNDGGSIITLTYYGAEKVMPNYN VMGVAKAALEASVRYLAVDLGNRGIRVNAVSAGPIKTLAASGIGDFRYILKWNEYNAPLKRTVTIEEVGKSALYLLSDLS TAVTGEIHHVDSGYHTIGMKAVDAPDISVVKD
Sequences:
>Translated_272_residues MAQASGLMAGKRGLIMGVANNRSIAWGIAKACADAGAELALTWQGDALKKRVEPLAQELGAFMAGHCDVTDLETIDSVFA SLEQHWGKIDFVVHAIAFSDKDELTGRYLDTSRDNFNRTMDISVFSLAAVAKRAEPIMNDGGSIITLTYYGAEKVMPNYN VMGVAKAALEASVRYLAVDLGNRGIRVNAVSAGPIKTLAASGIGDFRYILKWNEYNAPLKRTVTIEEVGKSALYLLSDLS TAVTGEIHHVDSGYHTIGMKAVDAPDISVVKD >Mature_271_residues AQASGLMAGKRGLIMGVANNRSIAWGIAKACADAGAELALTWQGDALKKRVEPLAQELGAFMAGHCDVTDLETIDSVFAS LEQHWGKIDFVVHAIAFSDKDELTGRYLDTSRDNFNRTMDISVFSLAAVAKRAEPIMNDGGSIITLTYYGAEKVMPNYNV MGVAKAALEASVRYLAVDLGNRGIRVNAVSAGPIKTLAASGIGDFRYILKWNEYNAPLKRTVTIEEVGKSALYLLSDLST AVTGEIHHVDSGYHTIGMKAVDAPDISVVKD
Specific function: Fatty acid biosynthesis pathway; second reduction step. [C]
COG id: COG0623
COG function: function code I; Enoyl-[acyl-carrier-protein] reductase (NADH)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family. FabI subfamily [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=257, Percent_Identity=26.4591439688716, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI7705925, Length=251, Percent_Identity=23.5059760956175, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI5031737, Length=260, Percent_Identity=27.3076923076923, Blast_Score=65, Evalue=9e-11, Organism=Escherichia coli, GI1787545, Length=259, Percent_Identity=50.1930501930502, Blast_Score=261, Evalue=5e-71, Organism=Escherichia coli, GI1789378, Length=262, Percent_Identity=29.0076335877863, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI87082100, Length=263, Percent_Identity=29.277566539924, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1787905, Length=247, Percent_Identity=28.3400809716599, Blast_Score=74, Evalue=8e-15, Organism=Escherichia coli, GI2367365, Length=253, Percent_Identity=29.2490118577075, Blast_Score=68, Evalue=7e-13, Organism=Escherichia coli, GI1787335, Length=256, Percent_Identity=28.125, Blast_Score=63, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6324126, Length=224, Percent_Identity=28.125, Blast_Score=70, Evalue=4e-13,
Paralogues:
None
Copy number: 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR014358 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.3.1.9 [H]
Molecular weight: Translated: 29200; Mature: 29068
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQASGLMAGKRGLIMGVANNRSIAWGIAKACADAGAELALTWQGDALKKRVEPLAQELG CCCCCCCCCCCCEEEEEECCCCEEHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHH AFMAGHCDVTDLETIDSVFASLEQHWGKIDFVVHAIAFSDKDELTGRYLDTSRDNFNRTM HHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCHHCCCEEECCCCCCCCEEE DISVFSLAAVAKRAEPIMNDGGSIITLTYYGAEKVMPNYNVMGVAKAALEASVRYLAVDL EHHHHHHHHHHHHCCHHHCCCCCEEEEEEECCHHCCCCCCCHHHHHHHHHHCEEEEEEEE GNRGIRVNAVSAGPIKTLAASGIGDFRYILKWNEYNAPLKRTVTIEEVGKSALYLLSDLS CCCCEEEEEECCCCHHHHHHCCCCCEEEEEEECCCCCCHHEEEEHHHHCCHHHHHHHHHH TAVTGEIHHVDSGYHTIGMKAVDAPDISVVKD HHHCCEEEEECCCCEEECEEEECCCCCEEECC >Mature Secondary Structure AQASGLMAGKRGLIMGVANNRSIAWGIAKACADAGAELALTWQGDALKKRVEPLAQELG CCCCCCCCCCCEEEEEECCCCEEHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHH AFMAGHCDVTDLETIDSVFASLEQHWGKIDFVVHAIAFSDKDELTGRYLDTSRDNFNRTM HHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCHHCCCEEECCCCCCCCEEE DISVFSLAAVAKRAEPIMNDGGSIITLTYYGAEKVMPNYNVMGVAKAALEASVRYLAVDL EHHHHHHHHHHHHCCHHHCCCCCEEEEEEECCHHCCCCCCCHHHHHHHHHHCEEEEEEEE GNRGIRVNAVSAGPIKTLAASGIGDFRYILKWNEYNAPLKRTVTIEEVGKSALYLLSDLS CCCCEEEEEECCCCHHHHHHCCCCCEEEEEEECCCCCCHHEEEEHHHHCCHHHHHHHHHH TAVTGEIHHVDSGYHTIGMKAVDAPDISVVKD HHHCCEEEEECCCCEEECEEEECCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]