Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is gpmB [H]
Identifier: 15888099
GI number: 15888099
Start: 753588
End: 754178
Strand: Reverse
Name: gpmB [H]
Synonym: Atu0756
Alternate gene names: 15888099
Gene position: 754178-753588 (Counterclockwise)
Preceding gene: 15888100
Following gene: 159184451
Centisome position: 26.54
GC content: 59.56
Gene sequence:
>591_bases TTGCTCGTCTATGTGATCCGACACGGACAAACGGACTGGAATGCGATACGCCGGCTTCAGGGCCAGAAAGACATTCCGCT CAATGATTTCGGCCGCCAGCAGGCGGTCGGCAATGGCAGGATTCTCGCCCGCCTTTTGGGTGAACGGGCCACGGATTTCG ATTATGTGGCAAGCCCGCTCGGGCGCACGCGCGAGACCATGGAACTGATGCGCGGCGCGATGGGTCTTGACCCTCTCGCC TACCGCACCGACGACCGTTTGATCGAAGTCTCCTTCGGCGACTGGGAGGGGCAGACCCTGCCCGACCTCAAGAAGGAATT CCCCGACCGGGTGAAGGCGCGCAAGGCCAATAAATGGGATTTCATTCCCCCCGGCCAGGATGCTGAAAGCTATGAAATCC TCTCCTGGCGCATCGGCGCATGGCTTTCCTCCGTGGAGGTGCCGACGATATGCGTCTGCCATGGCGGCGTCATCCGCTCG ATCTTCCGGCTTGTTTCAGGCATGGATAAGGACGAGGCGTCGAGGACGCAAATTCCGCAGGACCGGATTTTGAAGGTCGA GATGGACCGAAACAGTGCGGAATGGATTTAG
Upstream 100 bases:
>100_bases CGATTCCGGCTATCACACCATCGGCATGAAGGCAGTGGATGCGCCTGACATTTCGGTCGTTAAGGACTAAGCCTGCGACG TTTGAAAACGGGGTATCGCC
Downstream 100 bases:
>100_bases TGAGGGCTCAAGAAGCATAACCCTCGGCATTATCATCCCTGAGACGCTTTTATTTGGCTGAACGCCGCCGCTTCTTTCTT CTCCCCGGCGGGGAGAAGAA
Product: phosphoglycerate mutase
Products: NA
Alternate protein names: PGAM; Phosphoglyceromutase [H]
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MLVYVIRHGQTDWNAIRRLQGQKDIPLNDFGRQQAVGNGRILARLLGERATDFDYVASPLGRTRETMELMRGAMGLDPLA YRTDDRLIEVSFGDWEGQTLPDLKKEFPDRVKARKANKWDFIPPGQDAESYEILSWRIGAWLSSVEVPTICVCHGGVIRS IFRLVSGMDKDEASRTQIPQDRILKVEMDRNSAEWI
Sequences:
>Translated_196_residues MLVYVIRHGQTDWNAIRRLQGQKDIPLNDFGRQQAVGNGRILARLLGERATDFDYVASPLGRTRETMELMRGAMGLDPLA YRTDDRLIEVSFGDWEGQTLPDLKKEFPDRVKARKANKWDFIPPGQDAESYEILSWRIGAWLSSVEVPTICVCHGGVIRS IFRLVSGMDKDEASRTQIPQDRILKVEMDRNSAEWI >Mature_196_residues MLVYVIRHGQTDWNAIRRLQGQKDIPLNDFGRQQAVGNGRILARLLGERATDFDYVASPLGRTRETMELMRGAMGLDPLA YRTDDRLIEVSFGDWEGQTLPDLKKEFPDRVKARKANKWDFIPPGQDAESYEILSWRIGAWLSSVEVPTICVCHGGVIRS IFRLVSGMDKDEASRTQIPQDRILKVEMDRNSAEWI
Specific function: Unknown
COG id: COG0406
COG function: function code G; Fructose-2,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. GpmB subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790856, Length=175, Percent_Identity=33.7142857142857, Blast_Score=72, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR023086 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 22406; Mature: 22406
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: PS00175 PG_MUTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVYVIRHGQTDWNAIRRLQGQKDIPLNDFGRQQAVGNGRILARLLGERATDFDYVASPL CEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHHHHHHCCCCCHHHHHHHH GRTRETMELMRGAMGLDPLAYRTDDRLIEVSFGDWEGQTLPDLKKEFPDRVKARKANKWD CCHHHHHHHHHHHCCCCCCEECCCCCEEEEEECCCCCCCCCHHHHHCHHHHHHHCCCCCC FIPPGQDAESYEILSWRIGAWLSSVEVPTICVCHGGVIRSIFRLVSGMDKDEASRTQIPQ CCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCCHHHHCCCH DRILKVEMDRNSAEWI HHEEEEEECCCCCCCC >Mature Secondary Structure MLVYVIRHGQTDWNAIRRLQGQKDIPLNDFGRQQAVGNGRILARLLGERATDFDYVASPL CEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHHHHHHCCCCCHHHHHHHH GRTRETMELMRGAMGLDPLAYRTDDRLIEVSFGDWEGQTLPDLKKEFPDRVKARKANKWD CCHHHHHHHHHHHCCCCCCEECCCCCEEEEEECCCCCCCCCHHHHHCHHHHHHHCCCCCC FIPPGQDAESYEILSWRIGAWLSSVEVPTICVCHGGVIRSIFRLVSGMDKDEASRTQIPQ CCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCCHHHHCCCH DRILKVEMDRNSAEWI HHEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA