Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is cheR [H]
Identifier: 15887866
GI number: 15887866
Start: 508701
End: 509609
Strand: Direct
Name: cheR [H]
Synonym: Atu0518
Alternate gene names: 15887866
Gene position: 508701-509609 (Clockwise)
Preceding gene: 159184352
Following gene: 15887867
Centisome position: 17.9
GC content: 58.42
Gene sequence:
>909_bases ATGGCAGCACTTAATCTCAGCGATCAGCGACAGTCTCCCGATGACGTTCTTGCCAGCGGCGAATATCCGCTGACACGGCG CGATTTGTCGGAGATCGCTGCGATGATCTATGCCGATGCGGGCATCTATCTCAACGACACCAAGGCGTCGCTGGTCTATT CCCGCCTCTCGAAACATATCCGCAATCTCGGTCTTTCCGGCTTTCGCGAATATTGCGCACTGGTGTCTTCGTCCGAAGGT GCACAGCCGCGCCGGGAAATGCTGTCGCACCTGACGACAAATTTCACCCGCTTCTTCCGCGAGAACCATCATTTCGAACA TCTGCGTGACGAGGTCCTGCCGGGCCTCATCGCTCGTGCCAAGAGTGGCGGGCGTGTCCGCATCTGGTCGGCGGCCTGCT CCGACGGGCAGGAACCCTATTCGATTGCGCTGACCGTACTGGCCATGTTCCCGAATGCGGCCGATTACGATTTCAAGATT CTGGCCACCGATATCGATCCCAAGATTCTGGCGCAGGCCCGTGCCGGCGTTTACGATGACAACGCGCTTGAAACCGTGTC TCCTGCCATGCGCAAGCAATGGTTCACCGAGGTCGATGCCGGCGGTCGCCGCAAGTTCCGCATCGATGACAAGGTCAAGC GTCTCATCACCTTCAACGAGCTGAACCTGATGACGCAATGGCCCTTCAAAGGCAATTTCGACGTCATCTTCTGCCGCAAC GTCGTCATCTATTTCGACGAGCCGACGCAGGTGCGCATCTGGTCGCGTTTCGCGGGCCTGCTGCCGGAAGGCGGCCACCT CTATATCGGCCATTCCGAACGTGTGTCCGGTGACGCCAAGAACGTGTTCGACAATACCGGCATCACCACCTACCGCTTCA TCGGTCACGCATCCGGGAGGAAGGCATGA
Upstream 100 bases:
>100_bases GCGCTCATTCTGGATGTCGATGCCATCGTCAGCGCCTCGCGCGGACAGCCACTGAAACAGGAAATGTCACTCGCGGCGAC GGGTTGAAGGCGGATATCCA
Downstream 100 bases:
>100_bases GCGCACTCGCACGGGTCCTCGTCGTTGACGACTCCCCCACCATGCGCGGCCTGATTTCGGCCGTCCTCAAGGCCGATCCG GAAGTCGAGGTGGTCGGCCA
Product: chemotaxis methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MAALNLSDQRQSPDDVLASGEYPLTRRDLSEIAAMIYADAGIYLNDTKASLVYSRLSKHIRNLGLSGFREYCALVSSSEG AQPRREMLSHLTTNFTRFFRENHHFEHLRDEVLPGLIARAKSGGRVRIWSAACSDGQEPYSIALTVLAMFPNAADYDFKI LATDIDPKILAQARAGVYDDNALETVSPAMRKQWFTEVDAGGRRKFRIDDKVKRLITFNELNLMTQWPFKGNFDVIFCRN VVIYFDEPTQVRIWSRFAGLLPEGGHLYIGHSERVSGDAKNVFDNTGITTYRFIGHASGRKA
Sequences:
>Translated_302_residues MAALNLSDQRQSPDDVLASGEYPLTRRDLSEIAAMIYADAGIYLNDTKASLVYSRLSKHIRNLGLSGFREYCALVSSSEG AQPRREMLSHLTTNFTRFFRENHHFEHLRDEVLPGLIARAKSGGRVRIWSAACSDGQEPYSIALTVLAMFPNAADYDFKI LATDIDPKILAQARAGVYDDNALETVSPAMRKQWFTEVDAGGRRKFRIDDKVKRLITFNELNLMTQWPFKGNFDVIFCRN VVIYFDEPTQVRIWSRFAGLLPEGGHLYIGHSERVSGDAKNVFDNTGITTYRFIGHASGRKA >Mature_301_residues AALNLSDQRQSPDDVLASGEYPLTRRDLSEIAAMIYADAGIYLNDTKASLVYSRLSKHIRNLGLSGFREYCALVSSSEGA QPRREMLSHLTTNFTRFFRENHHFEHLRDEVLPGLIARAKSGGRVRIWSAACSDGQEPYSIALTVLAMFPNAADYDFKIL ATDIDPKILAQARAGVYDDNALETVSPAMRKQWFTEVDAGGRRKFRIDDKVKRLITFNELNLMTQWPFKGNFDVIFCRNV VIYFDEPTQVRIWSRFAGLLPEGGHLYIGHSERVSGDAKNVFDNTGITTYRFIGHASGRKA
Specific function: Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP (Potential) [H]
COG id: COG1352
COG function: function code NT; Methylase of chemotaxis methyl-accepting proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheR-type methyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1788193, Length=246, Percent_Identity=41.4634146341463, Blast_Score=178, Evalue=3e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022642 - InterPro: IPR000780 - InterPro: IPR022641 [H]
Pfam domain/function: PF01739 CheR; PF03705 CheR_N [H]
EC number: =2.1.1.80 [H]
Molecular weight: Translated: 34066; Mature: 33935
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: PS50123 CHER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAALNLSDQRQSPDDVLASGEYPLTRRDLSEIAAMIYADAGIYLNDTKASLVYSRLSKHI CCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHH RNLGLSGFREYCALVSSSEGAQPRREMLSHLTTNFTRFFRENHHFEHLRDEVLPGLIARA HHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC KSGGRVRIWSAACSDGQEPYSIALTVLAMFPNAADYDFKILATDIDPKILAQARAGVYDD CCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHCCCCCC NALETVSPAMRKQWFTEVDAGGRRKFRIDDKVKRLITFNELNLMTQWPFKGNFDVIFCRN CCHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHCCEEEECCCCCCCCEEEECC VVIYFDEPTQVRIWSRFAGLLPEGGHLYIGHSERVSGDAKNVFDNTGITTYRFIGHASGR EEEEECCCCEEEHHHHHHHCCCCCCEEEECCCHHCCCCHHHHHCCCCCEEEEEEECCCCC KA CC >Mature Secondary Structure AALNLSDQRQSPDDVLASGEYPLTRRDLSEIAAMIYADAGIYLNDTKASLVYSRLSKHI CCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHH RNLGLSGFREYCALVSSSEGAQPRREMLSHLTTNFTRFFRENHHFEHLRDEVLPGLIARA HHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC KSGGRVRIWSAACSDGQEPYSIALTVLAMFPNAADYDFKILATDIDPKILAQARAGVYDD CCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHCCCCCC NALETVSPAMRKQWFTEVDAGGRRKFRIDDKVKRLITFNELNLMTQWPFKGNFDVIFCRN CCHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHCCEEEECCCCCCCCEEEECC VVIYFDEPTQVRIWSRFAGLLPEGGHLYIGHSERVSGDAKNVFDNTGITTYRFIGHASGR EEEEECCCCEEEHHHHHHHCCCCCCEEEECCCHHCCCCHHHHHCCCCCEEEEEEECCCCC KA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA