Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15887842
Identifier: 15887842
GI number: 15887842
Start: 482513
End: 483241
Strand: Direct
Name: 15887842
Synonym: Atu0495
Alternate gene names: NA
Gene position: 482513-483241 (Clockwise)
Preceding gene: 159184341
Following gene: 15887847
Centisome position: 16.98
GC content: 61.59
Gene sequence:
>729_bases GTGCTGAGCCGGCTGACATTGAGCGACAGGTTTTCAAATGGCTTCGAATGCCTCGGCAGCGAAACCGCCATCCATGGTGT CGCCGCCTGGTGCGATCCTTTGGGCGGGCTCTACCTGCCGGACCTGTCACTGCTCGTCGTCTCCGACCTGCATCTGGAGA AGGGGGCTGCTTTCGCCCGGCGCGGCCGCATGCTGCCGCCCTACGACACCATTGCCACGCTTAAAATCCTGTCCTCGCTC GTCAGCCGCTATGATCCGAAGATCGTCGTCAGCCTCGGTGACAATTTCCATGATCGCGTCGGCTCGCAGCATCTGCCGCT GCCGCTGCGTGAACTCATCCGCGAAATGGCCCGCGGCCGCGAATGGATATGGATCAACGGCAATCACGATCCCGATGGTA CGGTCGACTTGCCGGGCTCGTCGGTGGATGAGATGTTTTACGGTAATCTCGTCTTCCGCCACGAGCCGAAAGTGGGAGAG GCAGCCGGCGAAATTGCAGGTCACCTGCATCCGTCCGCCACGGTTCGCCGTCGTGAGAAGACGGTGCGGCGGCCCTGTTT CGCCACCGACGGTTCACGGCTTTTGATGCCCGCTTTCGGGGTCATGAGCGGCGGGCTGGATCTGCGGCACCAGGCCATGC GTGGTCTCTTCGATCACACGGCACTCGTTGCGCATCTGATGGGGAGGGATCGCATCTATTCGGTGCGGTTTTCAAATCTG CTCGGCTGA
Upstream 100 bases:
>100_bases GGTGAAGCGATGGACGATGTGCTGGCCGAAGCCGCCGACGAGCTGATCGCGGAAGCCATGTCCTGAAGCATGAAATTGGA ATGAAGGAACGACCACACAA
Downstream 100 bases:
>100_bases GCGTATGTCGTCCAGCCGCCGCCTATTGGCGGTAGACCAGCACCGGTATCTTCGAGTTCTTCAGCACCTTTGCCGTGACG CTGCCGAGCAGCATCTCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: ICC-Like Phosphoesterase; Phosphoesterase Protein; ICC-Like Protein Phosphoesterase; Ser/Thr Protein Phosphatase Family Protein; ICC-Like Phosphoesterases-Like; ICC-Like Phosphoesterase; Calcineurin-Like Phosphoesterase; Metallo-Phosphoesterase; ICC-Like Phosphoesterases; Phosphoesterase
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MLSRLTLSDRFSNGFECLGSETAIHGVAAWCDPLGGLYLPDLSLLVVSDLHLEKGAAFARRGRMLPPYDTIATLKILSSL VSRYDPKIVVSLGDNFHDRVGSQHLPLPLRELIREMARGREWIWINGNHDPDGTVDLPGSSVDEMFYGNLVFRHEPKVGE AAGEIAGHLHPSATVRRREKTVRRPCFATDGSRLLMPAFGVMSGGLDLRHQAMRGLFDHTALVAHLMGRDRIYSVRFSNL LG
Sequences:
>Translated_242_residues MLSRLTLSDRFSNGFECLGSETAIHGVAAWCDPLGGLYLPDLSLLVVSDLHLEKGAAFARRGRMLPPYDTIATLKILSSL VSRYDPKIVVSLGDNFHDRVGSQHLPLPLRELIREMARGREWIWINGNHDPDGTVDLPGSSVDEMFYGNLVFRHEPKVGE AAGEIAGHLHPSATVRRREKTVRRPCFATDGSRLLMPAFGVMSGGLDLRHQAMRGLFDHTALVAHLMGRDRIYSVRFSNL LG >Mature_242_residues MLSRLTLSDRFSNGFECLGSETAIHGVAAWCDPLGGLYLPDLSLLVVSDLHLEKGAAFARRGRMLPPYDTIATLKILSSL VSRYDPKIVVSLGDNFHDRVGSQHLPLPLRELIREMARGREWIWINGNHDPDGTVDLPGSSVDEMFYGNLVFRHEPKVGE AAGEIAGHLHPSATVRRREKTVRRPCFATDGSRLLMPAFGVMSGGLDLRHQAMRGLFDHTALVAHLMGRDRIYSVRFSNL LG
Specific function: Unknown
COG id: COG1407
COG function: function code R; Predicted ICC-like phosphoesterases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26824; Mature: 26824
Theoretical pI: Translated: 8.14; Mature: 8.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSRLTLSDRFSNGFECLGSETAIHGVAAWCDPLGGLYLPDLSLLVVSDLHLEKGAAFAR CCCCCCHHHHHCCCHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCHHHHH RGRMLPPYDTIATLKILSSLVSRYDPKIVVSLGDNFHDRVGSQHLPLPLRELIREMARGR CCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCCCCCHHHHHHHHHHHCCC EWIWINGNHDPDGTVDLPGSSVDEMFYGNLVFRHEPKVGEAAGEIAGHLHPSATVRRREK EEEEECCCCCCCCCEECCCCCHHHHHHCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHH TVRRPCFATDGSRLLMPAFGVMSGGLDLRHQAMRGLFDHTALVAHLMGRDRIYSVRFSNL HHHCCCCCCCCCEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHH LG CC >Mature Secondary Structure MLSRLTLSDRFSNGFECLGSETAIHGVAAWCDPLGGLYLPDLSLLVVSDLHLEKGAAFAR CCCCCCHHHHHCCCHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCHHHHH RGRMLPPYDTIATLKILSSLVSRYDPKIVVSLGDNFHDRVGSQHLPLPLRELIREMARGR CCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCCCCCHHHHHHHHHHHCCC EWIWINGNHDPDGTVDLPGSSVDEMFYGNLVFRHEPKVGEAAGEIAGHLHPSATVRRREK EEEEECCCCCCCCCEECCCCCHHHHHHCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHH TVRRPCFATDGSRLLMPAFGVMSGGLDLRHQAMRGLFDHTALVAHLMGRDRIYSVRFSNL HHHCCCCCCCCCEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHH LG CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA