Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 15887847

Identifier: 15887847

GI number: 15887847

Start: 489550

End: 489831

Strand: Direct

Name: 15887847

Synonym: Atu0500

Alternate gene names: NA

Gene position: 489550-489831 (Clockwise)

Preceding gene: 15887842

Following gene: 159184345

Centisome position: 17.23

GC content: 52.48

Gene sequence:

>282_bases
ATGGTGCGATTGAGCGCATCAAGAGACGATCTGTCGCTTGGCTGTTGGGTTTTCGATCGCAATCCGTTCATCTTTTCGCT
CGCTTCGCTTCCGCCCGCCGTGCCCGGTTTTCTGTCGCGACGTTGCCTGTCTCGACAGGCTGTCGCCGCAACATGTCGCA
ATTCCAGAGCCGGTATTTGCCCCCTTGGAGGAAAATGCGCCGCTGAACGAAGCAGTTACCTCTTGTCGGAGAATTCACGA
AACGTGGTAAAGAAGTGGTTAACTATGGTTGGAATTTTTTAA

Upstream 100 bases:

>100_bases
ATAGGCCTCGTTTTTCGGTTCCGGCTGAGAGCTCGCAGCGCGCGGCTCACGCGGAAACTTCTGGCTCATCAGCCCTTCAA
TACGGGCTTCAAGGCCTTCA

Downstream 100 bases:

>100_bases
CTTTTACGGCTGAGGGCGCGCTTACGTCGGGCAAGGTGTCAGTGGGGGCCAAAAGGGAGGGCGATATTCAGCGGAAATTT
GTTTGACGTTTACGCGCACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MVRLSASRDDLSLGCWVFDRNPFIFSLASLPPAVPGFLSRRCLSRQAVAATCRNSRAGICPLGGKCAAERSSYLLSENSR
NVVKKWLTMVGIF

Sequences:

>Translated_93_residues
MVRLSASRDDLSLGCWVFDRNPFIFSLASLPPAVPGFLSRRCLSRQAVAATCRNSRAGICPLGGKCAAERSSYLLSENSR
NVVKKWLTMVGIF
>Mature_93_residues
MVRLSASRDDLSLGCWVFDRNPFIFSLASLPPAVPGFLSRRCLSRQAVAATCRNSRAGICPLGGKCAAERSSYLLSENSR
NVVKKWLTMVGIF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10195; Mature: 10195

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
5.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRLSASRDDLSLGCWVFDRNPFIFSLASLPPAVPGFLSRRCLSRQAVAATCRNSRAGIC
CEECCCCCCCCEEEEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
PLGGKCAAERSSYLLSENSRNVVKKWLTMVGIF
CCCCCCHHCCHHHHHCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MVRLSASRDDLSLGCWVFDRNPFIFSLASLPPAVPGFLSRRCLSRQAVAATCRNSRAGIC
CEECCCCCCCCEEEEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
PLGGKCAAERSSYLLSENSRNVVKKWLTMVGIF
CCCCCCHHCCHHHHHCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA